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Information for unigene UN51084
| FASTA Sequence |
| Unigene ID: UN51084 | Length: 908 |
SSR | | GATCAAAAGCTGGATCCATCATTATTCATAACATTACAGAGTCCAATATATGACTCAATGCTAAGTCATCATTAAAGAAAAACACT
CAAAGATTTTGTTTAAAAGTACAAAGTTCTCTCTCTCTCTCTTTTTTTCTTTTTTGGTAAATGATTATTGAGGTGCTAATGCTTTT
TGAAAACATTCATCTTGTCCCTAAGGGAGTAAAGTTTCCCTCTTTACCCTCTTCTTGTCCAACACCTTAATCTCCCTCAGGTTTGG
AGAATACAAAGGGAACATGGATTCGACTCCCACTCCAGCCACAAGCCTTCTAATCCTAAACGTAGAGTTAAGACCAGCATTACGCC
CTGCTATCACAATTCCTTTTACGATTGAAACACGCCTCTTGTTCTCAGGCACTTCCACTTTAAGCTGCACAATGTAACCGGGCCTT
ATCTCCGGTATCTCTCTACTAGTTCTCACTTCCTCCACAGCCTCCTTGTCTACAATCTGCATGATATGCTTGGCGGTTTTATCAAG
CCTCTTGAACTTAATTCTTGGAGGCGCATCAGGAGCTGACACAGGAAACCCTTGAGGAACAGACTCCCCAACGGTGGAAAAGCATC
TCGATGAATACGCAAAGTTTTGTCTAGGTAGTGCGGAAGAGAAAGAAGCGGCCTTTGTCAACGAGCTAATGAGATGACGCTGCTGG
CGAATCGAAGGCTCTGGTGGAACGGAATGAATCAAACCCTCCTCCTAGCCTCCTCGACTCATTATCATCAGACCAGCTTGGAGAAG
AAGACGAAGATGAAGTGAAACGAGGGAGAGTGTTGGAGATGGAGAAGCGGTTCCTCTGAAGCAACCTTGTACTGCTACGAATCGAT
TGCATTTTTCTTCCGCAAAGAGAGGATTCGATCTAATAATGCCCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192900 ribosomal protein L19 [Arabidopsis thaliana] | 639 | 2e-064 |
| XP_002871497 ribosomal protein L19 family protein [Arabidopsis lyrata subsp. lyrata] | 634 | 6e-064 |
| NP_196736 Ribosomal protein L19 family protein [Arabidopsis thaliana] | 622 | 2e-062 |
| NP_564213 Ribosomal protein L19 family protein [Arabidopsis thaliana] | 600 | 6e-060 |
| XP_002519953 50S ribosomal protein L19, putative [Ricinus communis] | 506 | 4e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82413 50S ribosomal protein L19, chloroplastic | 301 | 1e-026 |
| Q8W463 50S ribosomal protein L19-1, chloroplastic | 297 | 3e-026 |
| Q8RXX5 50S ribosomal protein L19-2, chloroplastic | 293 | 1e-025 |
| A9HS58 50S ribosomal protein L19 | 199 | 8e-015 |
| Q2RV56 50S ribosomal protein L19 | 198 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9T0D0 At4g11630 | 639 | 1e-064 |
| Q9LYF5 AT5g11750/T22P22_140 | 622 | 1e-062 |
| O48691 At1g24240/F3I6_17 | 600 | 4e-060 |
| B9S1T8 50S ribosomal protein L19, putative | 506 | 3e-049 |
| B9RAT4 50S ribosomal protein L19, putative | 494 | 7e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11630.1 ribosomal protein L19 family protein | 639 | 7e-067 |
| AT5G11750.1 ribosomal protein L19 family protein | 622 | 6e-065 |
| AT1G24240.1 ribosomal protein L19 family protein | 600 | 2e-062 |
| AT4G17560.1 ribosomal protein L19 family protein | 297 | 3e-027 |
| AT5G47190.1 ribosomal protein L19 family protein | 293 | 9e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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