 |
Information for unigene UN51094
| FASTA Sequence |
| Unigene ID: UN51094 | Length: 1319 |
| SNP | GAAGTAGGCAAATAGCATTACAAGGGAATCTCTATTGTTTTGTGAGTTTTGGATACAACAGAGAAACCATTCTTTTGAAATAAATA
GCCAAAGTGATCAATCAGAAGAATATCAATAGGTCTTTAATCCATTGTGTAGCTCTGTGTTGTTGCTGTTCTCTGGTTTATTGTTT
TTCTTTGGCTCTCTCTATAACTTGGGCAAATGGCGTGGAGTCTCCCACTCGGTGATAATGTGGTTCCGAGTGATCTCACTGAGAGA
CCTGCACCCACTTAGTGCCATGGTTAGCTCGAACTCATCGCGTAACATTTGAAGCACTTTTCTGACTCCAGCTTCTCCTTCAGCGG
CTAGTGAGAACACCACTGGTCTACCAATGAATATCCCGGAAGCTCCAAGTGCAAGTGCCTTGAAGACATCAGTTCCACGTCGAACA
CCACCGTCCAAGAAGACAGGAACTCGTCCTTGTGTCGCTTTAACAACCTCTTCAAGGGCTGAGATTGTTGCTGGGACATAGTCAAG
CTGACGAGCTCCATGGTTTGACACAATGATCCCTGCTGCTCCAGCTTGAATCGCTATCCTTGCATCTTCTCCTGTAAGAACACCCT
TGACAAGAATTGGCATGCTGGTGATTGTCTGGAGCCACTGGACGTCCTTCCAGCTCAAGGTACGGTCAATTTGACCAGCAACATAT
GAAGCCAAGCCAGAGTCATTGGCCTCGTCCATCTTTCCGAGGTCAAGACCTTCAAAGTTCTTCAATGTCAAGTTTGGAGGCAAAGT
GAATCTGTTCTTGATATCAGACTCTCTGCGACCTAGCCTTGGGGTGTCTACAGTGAGAGCAATGGCTTTGAACCCTGCCTTCTCGG
CTCTTCTCACGAGCTGCTCAACCACTTTCCTGTTCTTGTATACATAGAGCTGGAAGAATCGGATCCCTGGCCCTGTGGAAGCAACT
TCTTCAACGCTGGAAGTAGCCCATGAAGAGAGTGTCATGATGGTTCCAGCAGCAGACGCAGCTCTAGCCGTAGCATATTCACCTTC
AGGATGAGCCATCTTCTGCATGGCAGTAGGAGCAACCATGATCGGCATGGAGATCTTGAAACCCAAGACGTTTGTTGTCATATCAA
TCTTGCTCACATCAATCAGAATCCGAGGCCGAAAGAGGATCCTAGCGAAAGCGTTTCTGTTCTCTTGAAGAGTCCACTGGTCCTCT
GCTCCAGACGCATAGTAGTCATATACCATCTTAGGCAACTTCTCCTTTGCGATTGCTTCATACTCGGTAACGTTTGTGATCTCCAT
ATTTTTTCTTGATAGGAATGGAGAGGTTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAV28535 glycolate oxidase [Brassica napus] | 1840 | 2e-203 |
| NP_188059 (S)-2-hydroxy-acid oxidase [Arabidopsis thaliana] | 1801 | 5e-199 |
| NP_188060 putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] | 1775 | 6e-196 |
| AAL16258 AT3g14420/MOA2_2 [Arabidopsis thaliana] | 1771 | 2e-195 |
| NP_850585 putative peroxisomal (S)-2-hydroxy-acid oxidase 2 [Arabidopsis thaliana] | 1766 | 6e-195 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRS0 Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 | 1801 | 2e-200 |
| Q9LRR9 Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 | 1775 | 2e-197 |
| P05414 Peroxisomal (S)-2-hydroxy-acid oxidase | 1652 | 4e-183 |
| Q9UJM8 Hydroxyacid oxidase 1 | 1025 | 2e-110 |
| Q9WU19 Hydroxyacid oxidase 1 | 1009 | 2e-108 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3L1H0 Glycolate oxidase | 1840 | 1e-203 |
| Q56XF8 Glycolate oxidase like protein (Fragment) | 1801 | 4e-199 |
| Q2V3V9 Uncharacterized protein At3g14420.3 | 1766 | 4e-195 |
| Q39640 Glycolate oxidase | 1692 | 2e-186 |
| A5B1R1 Putative uncharacterized protein | 1690 | 3e-186 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14415.1 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | 1802 | 2e-201 |
| AT3G14420.1 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | 1776 | 2e-198 |
| AT3G14420.2 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | 1776 | 2e-198 |
| AT3G14420.3 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | 1767 | 2e-197 |
| AT3G14420.4 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | 1688 | 3e-188 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
