Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN51095

FASTA Sequence
Unigene ID: UN51095Length: 930 SSR 
TGGTCTGTGCTCTTGACATGTTTATCATCATTCATAACTAGTTGACACATGAAAGGATGAAACTACACAGCCTTTTGCATATTGTG
TTGTAGCAAAAGTTACAAAGGATAGAGGAGAAGAAAGTAAACCAACTTGAAGCTATGGGATCTCTTAGACACAAATGGTGGTATCT
GGAGCCACAATACCCTCAAGTTTCCAACCACCAGGTCCAGCCAGAGAGAAAGCATCATCCCAGGAGTTGCCAAAAGCATGAAGCAA
AGCAGCATTGCAAGTTTTCAGCTTTACGGAAGCACCAGAGAGCATGGAGGCTGCTTCTTCCCATCCCTTATTATGCCCCATACACA
TGACAGTGGTGATGTCAGGGGATGAGTATTTGGAGATGATGTGGTGAAGATGGTCGGCGGTTTGGCCGTCCATAGCGGCGATGGAG
TAGAAGCTAGGGATGAAATGTATATTCGCCTCCATAAAGCCATCGACTTGCGCTTGCATTGACTTCAGCGTCTCCTTGGTCCGAGT
CGCGTCGCTTGAGAGGATGAGTTGGGGAAGCCAGCCAAGTGAGGAGAGGATTTGAGCAACTTTAGCAGCATCGGCTTGACCGGACT
TAGTTAGAGGACGATCATGGTCTAAAACAGAGATATCAAGATTGGTGTTTTTGATTGATGAGATGAGAGAGAGAGAAGAAAGAGTA
TACCTTTGAGGGAAAGATGGTCCCAGGAACTGTGAGCGTGACGTAGAAGGATGAGACGGCGAGAGATTAGCGACGGAGAAGGAGAA
GAAGTTAGTTCGGTGGATGCACGAGGAGAGCAAGAAGTGGTGGTCCGGTTTTGGTGGCCGGAGAAGAAGAAAGGAGATGGAGACTG
GAAGCTCAGCATAGATTATTCTTATCTCATTTCATCTCTCTTGTAACTGATTTTTCCGGAAACATATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876128 hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp. lyrata]7611e-078
NP_566959 Phosphoglycerate mutase family protein [Arabidopsis thaliana]7548e-078
CAB41335 putative protein [Arabidopsis thaliana]7475e-077
XP_002307839 predicted protein [Populus trichocarpa]5819e-058
XP_002329970 predicted protein [Populus trichocarpa]5755e-057

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94BY1 AT3g52150/F4F15_2607546e-078
Q9SUZ0 Putative uncharacterized protein F4F15.2607474e-077
B9HBS8 Predicted protein5816e-058
B9N3X0 Predicted protein5753e-057
C6SVY5 Putative uncharacterized protein5701e-056

Arabidopsis top hits (Blast detail)Scoree value
AT3G52155.1 LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); Has 1050 Blast hits to 1050 proteins in 239 species: Archae - 0; Bacteria - 476; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).7552e-080

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information