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Information for unigene UN51115

FASTA Sequence
Unigene ID: UN51115Length: 1641 SSR 
AACGAAAGAAACAATTGATGGTCTTGATAGTATACTGTCACAAAATACAGTCTAAAACATTGTAAGAAACAGAAACTTCTGAGGCG
GTCTATTTAAAGCTCTTGACGATCCTGAACGTTTCAAGAACCGAAAAACAACCAAAAGTAAAAGAGAGATCACATCGAGACGAAGC
GGGCTTTGTACATAATGATGTACGCCATATGCCAATCCCCTCCTCCGGAGAGCTTTGTGATGTCTTCCTCCCGTTGCAGGCTTGGG
TGGCTATCGTCATACTGAATCCACTTGCCACTCTCTTGCTTGACCCATGCAACATAATGCCCAGAGTCTGCACTCCTGCCCTTGTG
GGTTAGGACAGAGACCAGGTCATAGATTCCGGTCATGTGAAGAGTTCCCTTCTCAGATGAAGCACCTTCTTGTTGAGTAACGGTGG
ATGATTCTCCACTTTCATTTGATGTCGCCTCTGCATCAGTCATTTTCACATCGGTCTCCTTTGAGCTACTCTTTGGTTGCAGACCA
AGCTTTTTACCTTCCTCATCTCTTAGTTTCTGGCGAGGAGCTTCCAGTTTCTTTCGGAGATCCTCAGAACAAAGGTCAAAAATATC
CAACTCCAGCGGATAATCCACTTTCCTAAGAATCTTTGCTTTCTGATTAGTCTCCCTTTTCCAGAAGAACCGCACAAACTGAACGG
TCAAGTAACTGGGCAAGGAATCTATAAGGGACTCCTTGAGGTAAAGCGCAGTACGGCCAAGAGCAGGAGATGTCTTTTCAAGTTCT
CCTTTCAGACCATGTTTTAATCCTTCATGCAAGTGGTTCACCTCGTGTGATATATGACATTTCAGAGAATATACAGATTCCGTCTC
TGAGCTTTCTTCGCCACTTTCTTGACAATGCACCCTGCTCCGAAGATTGACACCAAAGAGAGCTTTCACTGCATCAGAATCTTCGC
TGGAAGTTGGTGCTTTTAGGGACTGTGAAAGAGTGTACAACAGTTGTGTCCAACATTCTTCGGCATCCTGCTGCATGTGCATTCCA
TTCTGCAACTGACTAAACTGAGGGAACTTTTTTCGTAATGTCATCCAGAACTGCGTAGGGGAAACAGCATTGACACTTCTGTCAAG
ATCACCAAATAGCTCGCGTGTGGCAACTGTGAGCATGTGAGAAGTCTGGTCGACATCATTGCTTCGTCCAGTAAGTGCGTAGTTGG
ATAACGCAGATTTCAACTCTGGGACTGATTTTAAGCACTGCACCGTGGAGTTCATGTAACCTGTGTTGCCAAGGTTGACAAGGCCT
GCACTGTAACCCAAATGAGTGGCTTGCTCTTCTTCAGGTAGATCCTCAGCAAAAAAAATAGCCTTTTCAGGAGCTTTCACAATCTC
ATCTGCAGTTCCCATCATCATCCTTCATCCTTCAAGAGGCCACCTTTGACCATGATCTTTTGCCTCTCTGGAGGAACTCCAGTCAA
ATCATACAGCTGAGCCTTGAACACATAGGGAGGCAGAGTGGGATCAATCTCGATCCCTTCAAACACCTTCTTCTGCCACTTCACGC
TTACTGTGAGCATCTTTGTTTTCTGTGAGAACTGAGAGGTTTCTTGCTTGCTTGCTTGCTTGCTTGGAGAGACGGTAACGAGATTT
TGTCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894329 ubiquitin-specific protease 6 [Arabidopsis lyrata subsp. lyrata]19568e-217
NP_564596 ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]19262e-213
NP_001077698 ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]19262e-213
AAG42751 ubiquitin-specific protease 6 [Arabidopsis thaliana]19227e-213
BAB01721 ubiquitin specific protease; queuine tRNA-ribosyltransferase [Arabidopsis thaliana]17381e-191

Swiss-Prot top hits (Blast detail)Scoree value
Q949Y0 Ubiquitin carboxyl-terminal hydrolase 619261e-214
Q84WC6 Ubiquitin carboxyl-terminal hydrolase 717502e-194
P43593 Ubiquitin carboxyl-terminal hydrolase 65513e-055
Q92353 Ubiquitin carboxyl-terminal hydrolase 65316e-053
Q0IIF7 Ubiquitin carboxyl-terminal hydrolase 143381e-030

TrEMBL top hits (Blast detail)Scoree value
B3H5V4 Ubiquitin carboxyl-terminal hydrolase19262e-213
B9MWQ3 Ubiquitin carboxyl-terminal hydrolase16431e-180
B9T7A3 Ubiquitin carboxyl-terminal hydrolase16322e-179
B9N1B6 Ubiquitin carboxyl-terminal hydrolase16081e-176
A9NUT3 Ubiquitin carboxyl-terminal hydrolase15041e-164

Arabidopsis top hits (Blast detail)Scoree value
AT1G51710.1 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease19276e-216
AT1G51710.2 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease19276e-216
AT3G21280.1 UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7); ubiquitin thiolesterase/ ubiquitin-specific protease17512e-195
AT4G10570.1 UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9); cysteine-type endopeptidase/ ubiquitin thiolesterase1193e-006
AT4G10590.2 ubiquitin carboxyl-terminal hydrolase family protein1166e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  57%
 
93  43%

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