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Information for unigene UN51200
| FASTA Sequence |
| Unigene ID: UN51200 | Length: 1166 |
| SNP | AACGAAGAACACTAATGACTTCAGTCAACTGTCTCTCAAAGAACCAGGTACTCGCATTGTGTCCAAATAATTACGAATAAACAGTA
AGAAAAATCTTCGTTCGAACAGCAATACTTTGTTTTACAAAGCCTTTCCTGAGAAGGAAAAAAAAAAAACAGAAAACAAAAAAAAT
ACGCAGGGAGCCTCAGGTTGGTGGTATAACCAATAGGAGGAAACAAGGATGATGGTCCTATTCATGAGCCTGACCCTATCAACACT
TCGTTGCTTTCTCATTGTATCTTGTTCACCAGCATGTTCACTTGCTCCTTGTACATTTCCTTCAAGTCTACTATATCCGCTCGAAG
TTCCTCCAACTCCTCATCTCGTTCACCCATCAATTCCAGAGCAGCCGCATGCCTTTGTCTTAGTGCTTCCAGCTCTGCTTTTATGC
CCGGCACCCTATCCGCTTCCCCCCTTAATTTCTCACACTCTGCGGTCATTTTGACTAGTTCTTCAGCTAGCGAATCTCGGATAGAC
TCCATTGACGCCAAGCGGGACATGTAAGAAGCAAGTTCACCCTCTTTCTGTCGAAGTGTGGCTTCATAAGCACTCGGTGTGATGCT
CTTCATGTAGTATGGACTCATAGTTGCTTCAGGCATGCTTCTCTTCTCAGAAGATCTATCTGACGAATCAAGCGAAGCTTGCAGAA
AATAGCTTTCCTCCATGCTCCCAAGGCTGCTTGCGCTTGAGAGCTTTCTTTGCAAGCCTCCATTCTCATAGGTAGAATTTTGCCTT
GATATGGGAAGCTGTTCAGAGGCTGTCGAGGAATTGATACGGGCAGTTCTTTCAAGATCCAAACGGGTAGCCTTCTCCCTAGGATC
AAATAGACTTTTGGTATCAACTGCAGGTGGCCACATACTTGAAGCTTCACCGGTAGATTCGGACTTGTCATCAAAGCCAAGGGCGT
TGTCGAAATTCTTCTCGATGTTCTTAACGCTCTCCTGGAATTTATTGACTGCCCCAGTGAGATCTGGGAATCCTCCCAGCGATACT
TTCCCACTGAACCAAGCCATCACCACAATATCTGAAAACTTTGTTTAATCTCACAAAATCACCACCGGATCAGATCCATCTCCATC
CCTTGTGCTGATATTGGGATCAGTAAGAGCTTAGGAGATGCGTCGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_178101 golgin candidate 5 [Arabidopsis thaliana] | 892 | 1e-093 |
| NP_001185441 golgin candidate 5 [Arabidopsis thaliana] | 892 | 1e-093 |
| BAD94181 hypothetical protein [Arabidopsis thaliana] | 888 | 3e-093 |
| XP_002303293 predicted protein [Populus trichocarpa] | 767 | 4e-079 |
| XP_002267350 PREDICTED: hypothetical protein [Vitis vinifera] | 754 | 1e-077 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0WVL7 Golgin candidate 5 | 892 | 5e-095 |
| P82094 TATA element modulatory factor | 191 | 1e-013 |
| B9EKI3 TATA element modulatory factor | 190 | 1e-013 |
| P47166 Protein SGM1 | 126 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GXB9 Predicted protein | 767 | 2e-079 |
| Q2HU52 TRNA-binding arm; t-snare | 750 | 2e-077 |
| B9GG46 Predicted protein | 749 | 3e-077 |
| B9RQJ0 Myosin-2 heavy chain, non muscle, putative | 724 | 2e-074 |
| B8Q8B1 SKIP interacting protein 25 | 547 | 8e-054 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G79830.1 GC5 (golgin candidate 5); protein binding | 893 | 3e-096 |
| AT1G79830.2 GC5 (golgin candidate 5); protein binding | 893 | 3e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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