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Information for unigene UN51253

FASTA Sequence
Unigene ID: UN51253Length: 1483  SNP
GAGACAGAACAGTTTCTTTTGTGGGACAACAAATAATTGTACATTTTGTTCTTATAAACCGAAGGATGTAAACGATATTAACAGAG
ACAGAAACAAAAGAAAGAAATAGTAACACAACAGAGCAAGGAGAAGAATGTTCAACTGGAAGCGTGAGCATGAGAACGTGATGCCC
AAATTCCAAACACTAGAAACCAGAACACGAACAAGATTGCCCAGTAACGTGCTGGTCCATACCTGATTCTAGTCAGCACTACGAAT
CTGAAGAAGATGACTACTGTTAAAGCACAGAGTCCACCCAGGAGTATGTGCAGTCCACTCTTTGCAGTTCTTTTTCCAACACGTGG
AGCAATGAGCCAAGCCAAAGTAACAGTGAGTAATCCTGTAGCGAGCAGTATCCCTGTACCTTCCACAGCCCATTTAGTCGCTCTGC
TCTCCATAGGCAATATATCAAAACCAACTACACCCAAAGGCTGTTCAGATGTCACCTGAGAAGCAGCAGCCACCCCCGCAGCAACA
GCTGAATTACTACTATTATTGCTGTTGTTGTTTGTACAATGCGGACCAAACCACAACGAAATCTCACTAAGCCGCTGCCTTCGAAT
GGCTGCAACCGCATCAGGATCTATCCCCGAAGAGCTCGTGTTGCTGTTGTTGTTACTAACCGCTACAGGGTTGGGATCTCCATCCG
CCGTTCTTTCTCTCAGCGCTGCGTAGTCTTTCAACGCGATGACAACTCTGTTGAGATCAACCGTTCTTATATTCGCCGCGACGCTC
CCACAGATCTCGCAGACGGTCGATCCGTGGTTGACGAACCATTTCAACGCGCAGGCGTAGTGCACCAGGGCGAGATCGTTTTTGCA
AGAGCATCCGAGCTCCAGCAACGTGTCACGATGCTGCCAAGCTCCCATCTCTATGTCTTCGTCTGCGCAGACGAACACTTCTCCGT
CGGGACTTATCAGTTCGATGAAGCCGCTTTTCTTCTTCTTATCAGGGGTTTCTTGGTTTGCATTGCTTCCACGAGGTGGTTCTTCT
GAAACAACAGGAGGTGTGATGCCCAAAAAGCCTAACGCAGCGTCTCCTCTTCTGTCGGATTCTGCGCACTGGCACACGCGGCAAGT
TGGTAAACCAGTGTCCTTGTCTGAACTGTAACGTGGAGCTTCGTGTACATCATCGTTCTTGACAGGTGGAGAATCGTGATGATGAC
TGACTCCGCTATTGGTAATCTCCAGCGGACTCTCTTTACCCATCAAATCACAGATGAAACTTGTTCACGAGACAAGTTACACATCT
AAGACCATTTCTTCAGGATGAAATTCTACTCAAGAAGAAGTATCTAATATCACTCTAAGAGAAGAAGAAAGACGCAGAGCTCCTCC
GCAGAATCTGGGAAGAGATCGATTGTGAGAAGCTAGATTCCAGGCTCTTCCAAAACCCCCCCAAAAAAAGAAAAAGTAAAATCAAA
TGCGTCTCACTCTCTATCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568206 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]15955e-175
XP_002871357 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]15946e-175
AAL14416 AT5g63780/MBK5_26 [Arabidopsis thaliana]15911e-174
NP_001078548 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]15911e-174
NP_201183 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]12684e-137

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C5A2 At5g0875015953e-175
Q93ZD2 AT5g63780/MBK5_2615911e-174
Q8GUG6 At5g6378012791e-138
B9H4N8 Predicted protein12047e-130
B9HF63 Predicted protein11796e-127

Arabidopsis top hits (Blast detail)Scoree value
AT5G08750.1 zinc finger (C3HC4-type RING finger) family protein15952e-177
AT5G08750.2 zinc finger (C3HC4-type RING finger) family protein15952e-177
AT5G08750.3 zinc finger (C3HC4-type RING finger) family protein15915e-177
AT5G63780.1 SHA1 (shoot apical meristem arrest 1); protein binding / zinc ion binding12798e-141
AT2G34200.1 zinc finger (C3HC4-type RING finger) family protein1588e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  13%
 
201  13%
 
104  50%
 
181  13%
 
211  13%

Unigene MembersMember information