 |
Information for unigene UN51271
| FASTA Sequence |
| Unigene ID: UN51271 | Length: 1130 |
| SNP | GGATATTTCATTCTCTTCTCTACACTCACTCTCTTTCTCTATACAGTCATGGCTTCTCCCATCACCATCACACTCATCTTCCTCTT
CCTCCTTTATTCAGCACAAGGCAAACGCACCTACATCGTCCGGGTTAAACACTCTGATAAACCGGAATCTTTCTCAACTCACCACG
ATTGGTACACTTCGCAACTCCAATCTATCTCCAGCGATCCACTGTCACAATCGGAACCGGGATCTGAATCTCCTCTTCTGTACACG
TACACAACCTCCTTCCATGGCTTCTCGGCTTTTCTGGACACCAACGAAGCTGAATCCCTCCTCAACTCTCCTCTCCGTGATGCTGC
AGATAACAGCCTCTCCAACCCACACGCTCACGGCTCGGGCCACGTAGATCCTCAAAAGGCTCTCTCGCCGGGTCTTGTCTACGACA
TCTCGACTGAGGAATACATCAGGTTCTTGTGCTCTCTCGACTACACAGTAGATCACATCGTGGCGATTGTGAAGCGACCAAGCGTT
AACTGCTCGAAGAAGTTCTCTAATCCTGGGCAGCTCAATTACCCAAGTTTCTCGGTTTTGTTTGGTGGCAAAAGGGTTGTGCGGTA
CACCAGGGAGGTAACCAACGTGGGTGAAGCGAACTCGGTTTATAAAGTGGTGGTTAGTGGAGCACCTAGTGTTGGGATATCGGTTA
AACCATCGAAGCTTGCGTTTAGAAGTGTGGGAGAGAAGAAGAGGTACACGGTCACGTTTGTAAGCAAAAAGGGAGTGAGTTTGACG
AACAAGGCTGAGTATGGATCCATCACTTGGAGCAATCCGCAACACCAAGTAAGAAGTCCCGTGGCATTCTCATGGAACCGGTTTTG
ATTACAAAAAAATAAACACAAATCTAAATCTAACATCCCAGTGATGTTTTCTGTTTTTAAGTTTATTTACTGTTCGAGAAGATTTC
AGTTCCTAAAGTGACTGTGGTTTAGGATAAACAAAAACTTATCCTGAGCCATAAGCAATGCTAATCGTTCTTTGTTTGATTTGTGT
TTGAATGTACTGTGTGGATGGATGGGTAGAAAAAATGTTGTCAAGGAAAGAACGTTGATGTTATATGTTATTATTGTTTGGAAAAA
TTCGCTTTAACT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885806 predicted protein [Arabidopsis lyrata subsp. lyrata] | 889 | 2e-093 |
| NP_565330 Subtilase-like protein [Arabidopsis thaliana] | 883 | 1e-092 |
| BAD94244 serine protease like protein [Arabidopsis thaliana] | 879 | 4e-092 |
| ABK96588 unknown [Populus trichocarpa x Populus deltoides] | 700 | 2e-071 |
| XP_002326128 predicted protein [Populus trichocarpa] | 700 | 2e-071 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O65351 Subtilisin-like protease | 353 | 1e-032 |
| Q9LLL8 Xylem serine proteinase 1 | 251 | 1e-020 |
| Q39547 Cucumisin | 246 | 4e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZUF6 Putative subtilisin serine protease | 883 | 8e-093 |
| Q56WY6 Serine protease like protein | 879 | 2e-092 |
| A9PJN5 Putative uncharacterized protein | 700 | 1e-071 |
| B9MSZ9 Predicted protein | 700 | 1e-071 |
| B9RR97 Xylem serine proteinase 1, putative | 660 | 6e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G05920.1 subtilase family protein | 884 | 4e-095 |
| AT5G67360.1 ARA12; serine-type endopeptidase | 353 | 1e-033 |
| AT5G51750.1 ATSBT1.3 (ARABIDOPSIS THALIANA SUBTILASE 1.3); identical protein binding / serine-type endopeptidase | 341 | 3e-032 |
| AT3G14240.1 subtilase family protein | 316 | 3e-029 |
| AT1G01900.1 SBTI1.1; serine-type endopeptidase | 303 | 8e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
