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Information for unigene UN51285

FASTA Sequence
Unigene ID: UN51285Length: 627  SNP
TGGATATAAGTTATGCTAATATATATTAGATTCATAGGATTACAATGATATCATCATATCTCAAACATATTAAGATACAACTTAGG
AAAACCATAGGACAAAGGCGTAGTGTGATAGCAGCGTCCATAGACGTGTTTTATTTTATTTATGCTAAACCATACTCTCCATACAC
ATGCTGATATAATTAAACTTCCACTTCACTTGACGGTGTCGCAGTTAGTGCTCATGGAGATGGGATAAGGAATGGTAACACCGCAC
TTTCCAGGAAGACCAGCGGCTAGACTTGGGTTAAGACCAGCAACGCTCTTTGCAGCGGACTGTAGGCATTTGCATGCTTGTTGACG
GTCTGGTGTGGTTTGAGCCATGCCATTCAACTTAGTGACTCCAGCACAGCACGGAGGCGGAACCTCCCCACCGTTCGATAGATAGT
TGGCACATGGAGCCAAGCTACTTGCCACTGTGCCACATGAGATTTCTGCATCTACTGATGCAACAATGCACACTGTCAGAACAATG
CAAGTGAAGAACCTCAGAGCCAAAGCCATTTGTGTGTTTGCTTTTCTTTCTTTATTTTTGTGATAAAATATGAATATTTGTCTCTA
CTTATGTTTTGTTGTTTGATATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864626 hypothetical protein ARALYDRAFT_496059 [Arabidopsis lyrata subsp. lyrata]5332e-052
NP_568905 non-specific lipid-transfer protein 3 [Arabidopsis thaliana]5099e-050
XP_002864627 predicted protein [Arabidopsis lyrata subsp. lyrata]5072e-049
AAM66088 nonspecific lipid-transfer protein precursor-like protein [Arabidopsis thaliana]5044e-049
BAB09777 lipid transfer protein-like [Arabidopsis thaliana]5018e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q9LLR7 Non-specific lipid-transfer protein 35095e-051
Q9LLR6 Non-specific lipid-transfer protein 44801e-047
Q9M5X7 Non-specific lipid-transfer protein3482e-032
Q9M5X6 Non-specific lipid-transfer protein3402e-031
Q9SCZ0 Non-specific lipid-transfer protein 123312e-030

TrEMBL top hits (Blast detail)Scoree value
Q8S2S8 Non-specific lipid-transfer protein5007e-049
Q19R27 Non-specific lipid-transfer protein4901e-047
Q9ZSL7 Non-specific lipid-transfer protein4666e-045
Q0Z8V0 Non-specific lipid-transfer protein3521e-031
Q5GLH0 Non-specific lipid-transfer protein3492e-031

Arabidopsis top hits (Blast detail)Scoree value
AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding5103e-052
AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding4924e-050
AT3G51590.1 LTP12 (LIPID TRANSFER PROTEIN 12); lipid binding3312e-031
AT2G38540.1 LP1; calmodulin binding3142e-029
AT2G38530.1 LTP2 (LIPID TRANSFER PROTEIN 2); lipid binding3062e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
911  37%
 
103  10%
 
67  23%
 
127  23%
 
112  7%

Unigene MembersMember information