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Information for unigene UN51286

FASTA Sequence
Unigene ID: UN51286Length: 1149 SSR 
CTTTTAAGTGTCACATTTTATTAGTCTTTTCAACATGAACAATTCATTACAAACCCCCCCAAGTTTTTTTTTTACATGAAAATGTT
TCATTTTTTTTTACCAAGATGATCCTTAAGATTGCATTATGAATGAGGAAGTTAGTAGAGAAAATTTAATATCTTGGTCTCTTCTT
TTTCTTCTTTCTTCACAAGCACACACTTAGTTTTTGTTTGTTGTCCTGAGAAGGATCTTTTTAAGTTCTTAGACAGAGTCAACTCC
TTCGCCTTGTTGCTGTGCAAGATATCTCTCTCGGCGCTCCTTCCATTCATCGATTACAAGTCCTTCTCCGATCATCTTTGGACCTG
TTTCCTCTGGTGGTTTCTTTCTTGCCTCCACTGCTGCATCTGCTTCAGCTAACTGGCGCTTCAGTTTCTCCAGTGCAGGGTTGGGG
CGCTCTGGATCCAGGAAAATTACACGCAATATTTGCTCCTTGGACACATCATCCTTTTGCTCATCAAACAGCTCAGGAACATAGTC
CATTGGACCTTTCACCTTCAGGCTCATGATTTTAAACTTAACTCTGCTCCTTTGATCCATCGGCTTCTCATTATTCTCGGGAGGCT
CAACAAATTTGAACACAGTGGCGATGATAGTCTCTCCCGGAGCAAGAATAGCACCCGGTGGACGCATAAAGCAACTCTTCGGCGCT
GTTGTTTGAAACTTAAAGGCTACATGTGATTTGCTGGTATTTTTAATTTTAATAGCGCTTCTCACTTGCTTCCCAGGCTCATAAGG
AAAATAGAGTTTCTCCGACGGATCAAGCTTCAATCTACGTTTCGTAGGGAGAAACGACTTAGCTACCGATGATACCGAAGGAGAAG
GAGTCGGGTGTTGGTTTTGACCCGATCCGTCACCGTGGGGCCCGTTATAGCCAAGCTGATGATGATGATGGTGGTGATGATGATGA
TGTTGGTGGTGGTTATGGAGATGAGAAGATGTAGTAGAAGAAGAAGAAGACGTGGCGGCGGCACTTGATGCTGCGTTTCCGAGGCC
GCTAGAGTTTCGAAACGGGATCTTGAAGAAACCCCAACCTCCTCGGCCATCGGAAGATGGTTTCTCCTCCCTTGTCGTCGTCATGG
TCATCTCTTTGTCGCAGTTAGGACATGCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869886 vesicle-associated membrane family protein [Arabidopsis lyrata subsp. lyrata]14441e-157
NP_567627 vesicle-associated membrane family protein [Arabidopsis thaliana]14403e-157
NP_974584 vesicle-associated membrane family protein [Arabidopsis thaliana]10183e-108
XP_002317246 predicted protein [Populus trichocarpa]10093e-107
NP_567287 vesicle-associated membrane family protein [Arabidopsis thaliana]9942e-105

Swiss-Prot top hits (Blast detail)Scoree value
Q0KHT7 Probable serine/threonine-protein kinase CG326661424e-008
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571318e-007
Q54GQ1 Myotubularin-related protein DDB_G02900051254e-006
Q24523 Protein bunched, class 2/F isoform1245e-006
B4JHI7 Lateral signaling target protein 2 homolog1229e-006

TrEMBL top hits (Blast detail)Scoree value
Q8VYN2 Putative membrane associated protein14402e-157
O65410 Putative membrane associated protein13524e-147
Q3E7Q2 Putative uncharacterized protein At4g21450.210182e-108
B9HYN1 Predicted protein10092e-107
Q8LPQ7 AT4g05060/T32N4_129941e-105

Arabidopsis top hits (Blast detail)Scoree value
AT4G21450.1 vesicle-associated membrane family protein / VAMP family protein14419e-160
AT4G21450.2 vesicle-associated membrane family protein / VAMP family protein10181e-110
AT4G05060.1 vesicle-associated membrane family protein / VAMP family protein9955e-108
AT5G54110.1 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule8324e-089
AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein1514e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
67  100%

Unigene MembersMember information