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Information for unigene UN51353
FASTA Sequence |
Unigene ID: UN51353 | Length: 1042 |
SSR | | GCTATTAAAATTTCAAACAAACCAAAAATTACAAGATAAAAGGGTTTCGAGAAGAAACCAAGACAAAGATAAAACTTTGGAAGTAA
AAAAAAAACAAGCCCCCTTCATAGACGATTCAATTATACAAAAGACTTTTAACCCTAAGAGAAGCTAAACCATCATCCTCTTCTTC
ACTTCTTCCTCGTCGAAGCTCTTTTCGCTGGAGACTTAACCTTCGCACTCTTAGCCGGAGCTTTCTTAGCAGGCGCAGCAGCTTTC
TTAGCTGGAGCTGCCTTCTTAGCAGGAGCAGCCTTCTTCCCTGGAGACGTCCTAGTCGAAGTCCTCGAAGCTTTAGCAGGTCTCTC
CTTCGCCTTAGGCTTAGCAGCAACAGCTTTAGTCTTCGAAACCGCAGCTACACTCTTCGTCTTAGGCTTCGCAGTAACTTTCGGCT
TCGCAGCAGTTTTAGTTGTCGTCGTCTTAGCCTTTGCCTTAGGCTTAGCAGCAGCAGGTTTCTTGGTTCCTTTAGCAGCTGCTTTG
GCCTTAGCAGGAGCAGCAGCTGCTTTACCCTTCGGTTTAGTAACCGAAGCAGCCGGTTTCTTCTTAACCGCAGCCGGTTTAGCCGC
TGAAGCAGAAGGAATCTTGAAAGAGGCTTTGACTTTGACGAGCTTCCCCGAAGCGACGAGTCTCCTGAGATTGACGAGGAGAAGCT
TCCTGAAAGTAGGAGGAAGCGACTTCTGCTTCTCTTCGATGAACTTCTGAATCGCGTATTGGCTAGATCCGGTCCTCTCCTTCAAC
GTCACGATCGCATCCTTTATCATCTCTTCGTAAGGAGGATGAGACGAAGTGGTTCTCTTCCTCGGAGCAGCAGCAGCAGCAGGCTT
CTTCTTAGCTTCCTTCGTCTTCTTAGCTTTAGCTTTAGCAGCAGGTTTCTTCTCCGTCGTCGTCACCGTTGCGGCTTCGGCTTCGG
CGTCTCCCGACTCCACGACCTTGGGTTCTTCCTCCGTCGACATCTTTTTTAGGGATTCGAAAAAGTTTTTTTTTGTTTTGTTGGTT
TTTGAGATCC
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GenBank top hits (Blast detail) | Score | e value |
NP_180620 histone H1.2 [Arabidopsis thaliana] | 867 | 8e-091 |
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata] | 786 | 2e-081 |
XP_002302069 histone H1 [Populus trichocarpa] | 679 | 5e-069 |
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata] | 674 | 2e-068 |
NP_172161 histone H1.1 [Arabidopsis thaliana] | 667 | 1e-067 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G30620.1 histone H1.2 | 867 | 3e-093 |
AT1G06760.1 histone H1, putative | 670 | 2e-070 |
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 251 | 8e-022 |
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 188 | 2e-014 |
AT1G14900.1 HMGA (HIGH MOBILITY GROUP A); DNA binding | 173 | 9e-013 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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