 |
Information for unigene UN51385
| FASTA Sequence |
| Unigene ID: UN51385 | Length: 1063 |
SSR | | ATCAGAAAGCTTTGGCTCTAACCGGAGTAAACCAATTACAAGTACACTAGGATATGCTTAACCGAATGTATTAAAGAAAGTGTTCG
AACTCTGAAGAATTGTAAAACAAGGTTTAAGATAATAAAGATGAAGAAACCAAAAGCTGGGTGTGATTTACATCTGATTGATTCCC
GACAAATAAACAACATCAAGAAACCAAACACACAAAGCCTGTCTCCTCCACTGCACCGATGACTGCGTCTGCTGTTTATTTAGCGG
TTCTCGAGTGCTTAATGAGCCAATCAATGACTGCATCGATGTTGATCGAGTCCTTACACGAGATCATGTAACAACAGACCTCTCTG
TCAGCTACGGAATCAAGCCCTAGTTGATCAACCAAAGCTTGCTTGGAGAGAGCTTCAGACTTATCAATCTTGTTGCCTAGGATCAA
AAGAGGAATACCGTTCAAGGACGGTTTCGTTAACAGATCATGCAACTCACTTCTTGATATGGGTACACTGTCTCGGTCTGCAGCAT
CAATCACATATACAATGGCGGAAACTCCACGACAGTAACGCTCCCACATGGTGCGGAACCTTCGTTGGCCTCCAAGATCCCAAATC
TTGATGGTAACGTTTCCTTTAGTGACTTTCCTCATGTTGAACCCCACAGTTGGTATCATATCTTCACTGTAACCTCCAGTAGCGAT
GGCATTGACAAGAGAAGTCTTTCCAGCATTCTGAAGGCCAACGAGTGAGAGCTCCATCTCTTGTTTGAAGAACAAGCTGGGCAAAT
TGCAATCAAATATAACATCAAGTATATACTGATTTGGGTTGAAATGATAAATCAACTAATGCACAAGAACATCTAAAGGAACAGTA
TATCAATTCATACAATGTAATAATAATAATAAAAAAGGATACATCCCAAGAAAAAAGAAACTCAGAAAAGTTGTAAAGATTCTGAA
ACAAAAGCAAAAAAGTCTCGTTGTATCTTTCTGAGCAAACTACAACTACTTCACTCTAAATCAACTTGATTAACAAAAGAGATGAT
TTTTTATACAAAATCGCAACAGAGAGAAAAA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870553 hypothetical protein ARALYDRAFT_915910 [Arabidopsis lyrata subsp. lyrata] | 870 | 4e-091 |
| NP_568553 ADP-ribosylation factor-like A1A [Arabidopsis thaliana] | 862 | 3e-090 |
| ACU13317 unknown [Glycine max] | 845 | 3e-088 |
| XP_002531018 ADP-ribosylation factor, putative [Ricinus communis] | 841 | 8e-088 |
| NP_001147766 ADP-ribosylation factor-like protein 8A [Zea mays] | 831 | 1e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9NVJ2 ADP-ribosylation factor-like protein 8B | 631 | 8e-065 |
| Q9CQW2 ADP-ribosylation factor-like protein 8B | 631 | 8e-065 |
| Q66HA6 ADP-ribosylation factor-like protein 8B | 631 | 8e-065 |
| Q6NZW8 ADP-ribosylation factor-like protein 8B-A | 629 | 1e-064 |
| Q2KI07 ADP-ribosylation factor-like protein 8B | 627 | 2e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W4C8 ADP-ribosylation factor-like protein | 862 | 2e-090 |
| C6SVP4 Putative uncharacterized protein | 845 | 2e-088 |
| B9SYE9 ADP-ribosylation factor, putative | 841 | 6e-088 |
| B6SUV2 ADP-ribosylation factor-like protein 8A | 831 | 8e-087 |
| C5XZB8 Putative uncharacterized protein Sb04g028860 | 831 | 8e-087 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G37680.1 ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding | 862 | 1e-092 |
| AT3G49870.1 ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding | 744 | 6e-079 |
| AT5G67560.1 ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding | 741 | 1e-078 |
| AT3G49860.1 ATARLA1B (ADP-ribosylation factor-like A1B); GTP binding | 624 | 5e-065 |
| AT2G24765.1 ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding | 268 | 9e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
