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Information for unigene UN51402
| FASTA Sequence |
| Unigene ID: UN51402 | Length: 1023 |
SSR | | TTTTTTTTAACAGCCCCGGTGAAAGACAACCTTAAATATTCCCGTCTTCTTAATTTAAAAATTAAAAAAATATACATTTTTGATTC
AGAGCCAAGTAGATAACAGCTAGGAAAACAAAACACGTGCAACTAAGTGTCTCTCCCATCACTACAGTAGTACTAGTGCTAGTGAG
AGAGAGACCCACACTCACATGATCTACCTTCCATCTTGATTAGTTGTTGTTGTTTACTAAGCTCAACGAGTAGGAGCCTAGGAGGT
GATGATGAAGAAGACTAAGATTACGGATACAAAGAACGTGGTTCTTGGGTTTTGGAGTTTGAATCCAGAGGATGTTGGATCTGTGT
AATCTGGGATTCCAGACGGGATTCCCAAACCTCCTCCTCCTCCTGTTGATGATGATGTGTAGGGTCTTGTATTAGTTGTCGTTGGG
ACTCTTGTCGAAGGTGTTGTCGTCACTGGCGTCGTTGTCCCACTACCACTTGCACTTGCAGGAAAAGGACAAGATGTGTAGCTAGG
ATCAGAGGCTGAGACGGTGGCTGTGCCGGCGAAGTCACAAGTTCCCTGAGACTGACCTTTCTTTTGAAAGAAGCTGTTGACGGCGT
AGGAGCAGTGGGACTTGACTGTGTTTGGGTTAAAGCAAGGTCCGTTCTGGTGAATGGGTTTACAGTCGGCTCCTGCACCACATGCG
TAGTCCAATGTCTTCTGCAGCATTGCTTCACTTAATCCTTCTCTGCATACACACCATGTCCCACTCGAGTGACCAACCATAGCCAA
GAAAATCACAGCAAGAACAACAACAGCCGCCATGGCTTTGCACCAGAGCTAACCACAGGATTTGGATGCAGCTTGTTCCTCTTAGG
CGGAGAGGGAATGGAAATGATTGTAGAAGGTTTTGAAGCTAACAATAGCTGTGAGAAAAGAGAGAGAAAGAGAGACACTGCACTGA
AGAGAGTGAAAAAGAGAGACTTTTTGCTTAGATCCTGCAGAACAATGATGTCTTTTAGTTATTACACTCACACACCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002893006 hypothetical protein ARALYDRAFT_889285 [Arabidopsis lyrata subsp. lyrata] | 790 | 6e-082 |
| NP_564059 plasmodesmata callose-binding protein 3 [Arabidopsis thaliana] | 774 | 5e-080 |
| XP_002284112 PREDICTED: hypothetical protein [Vitis vinifera] | 522 | 8e-051 |
| ACU14839 unknown [Glycine max] | 510 | 2e-049 |
| CAN73948 hypothetical protein VITISV_027381 [Vitis vinifera] | 493 | 2e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SD84 Glucan endo-1,3-beta-glucosidase-like protein 3 | 449 | 1e-043 |
| Q9FNQ2 Glucan endo-1,3-beta-glucosidase-like protein 2 | 441 | 8e-043 |
| Q93V72 Glucan endo-1,3-beta-glucosidase-like protein At1g69295 | 333 | 3e-030 |
| Q9M069 Glucan endo-1,3-beta-glucosidase 7 | 256 | 2e-021 |
| P52409 Glucan endo-1,3-beta-glucosidase | 240 | 2e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FZ86 At1g18650 | 774 | 3e-080 |
| B9RLP4 Hydrolase, hydrolyzing O-glycosyl compounds, putative | 520 | 9e-051 |
| C6T016 Putative uncharacterized protein | 510 | 1e-049 |
| A5AZD0 Putative uncharacterized protein | 493 | 1e-047 |
| A9PAS0 Putative uncharacterized protein | 485 | 1e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18650.1 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | 774 | 2e-082 |
| AT5G08000.1 E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding | 449 | 9e-045 |
| AT5G61130.1 PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding | 441 | 7e-044 |
| AT4G13600.1 EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding (TAIR:AT5G08000.1); Has 804 Blast hits to 768 proteins in 66 species: Archae - 0; Bacteria - 9; Metazoa - 8; Fungi - 36; Plants - 728; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | 372 | 7e-036 |
| AT2G03505.1 glycosyl hydrolase family protein 17 | 347 | 6e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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