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Information for unigene UN51407

FASTA Sequence
Unigene ID: UN51407Length: 670  SNP
GGGACCGATTAGAAGACGAACCTCGAAGAGATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATCACTCTCGAGGTCGAGTC
CTCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGTCTGATCTTCGCCGGTA
AACAGCTCGAAGATGGCCGTACTTTGGCTGACTACAACATCCAGAAAGAATCGACGCTTCATCTTGTGTTGAGGCTTAGGGGAGGT
ATCATTGAGCCTTCTTTGATGGCGTTGGCTCGTAAGTACAACCAAGATAAGATGATTTGCCGCAAATGCTATGCTCGTCTTCATCC
AAGAGCTGTGAACTGCAGGAAGAAGAAGTGTGGCCATAGCAACCAGTTGAGGCCTAAGAAGAAGATCAAGTAGACTCGTTTCAAGA
ATCTATCTTGTTTGCCTCTTTTTAATTATCTTTCCCTTGACTACGTCGTTTTTATGTTATGTGAACAGATTATATCAGTAAAATGA
TTGGTTTTCAATATTGGTTTCCTTTATTCCTTTATCTATATGTTTGTTTTTGATTTTTATTTTATGTACTCTAGACGTTTAGATGA
TTGTCTTCTTCCGAAATATGGTTGCAGTAATTTACAAGTGTAAAATCATTAATTAGAAGAGGGAAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002282071 PREDICTED: similar to ubiquitin fusion protein [Vitis vinifera]6613e-067
P49636 RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=60S ribosomal protein L40; AltName: Full=CEP52; Flags: Precursor6586e-067
XP_002318470 predicted protein [Populus trichocarpa]6578e-067
ACU14903 unknown [Glycine max]6578e-067
NP_565836 60S ribosomal protein L40-2 [Arabidopsis thaliana]6561e-066

Swiss-Prot top hits (Blast detail)Scoree value
P59263 Ubiquitin3796e-036
P69308 Ubiquitin3796e-036
P69309 Ubiquitin3796e-036
P69310 Ubiquitin3796e-036
P69311 Ubiquitin3796e-036

TrEMBL top hits (Blast detail)Scoree value
A5AZI0 Putative uncharacterized protein6612e-067
B3TLP6 Ubiquitin fusion protein6612e-067
B8LP57 Putative uncharacterized protein6612e-067
B9SWD7 Ubiquitin, putative6612e-067
D6BR61 Ubiquitin C variant6612e-067

Arabidopsis top hits (Blast detail)Scoree value
AT2G36170.1 ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A)6574e-069
AT3G52590.1 UBQ1 (UBIQUITIN EXTENSION PROTEIN 1); protein binding / structural constituent of ribosome6574e-069
AT1G65350.1 UBQ13; protein binding3805e-037
AT4G05320.2 UBQ10 (POLYUBIQUITIN 10); protein binding3805e-037
AT4G02890.1 UBQ14; protein binding3805e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  21%
 
124  29%
 
63  21%
 
114  29%

Unigene MembersMember information