 |
Information for unigene UN51463
| FASTA Sequence |
| Unigene ID: UN51463 | Length: 910 |
| SNP | CACGATCAATAAAATAGAACATATCATATAACTCAAACCAGCTCCAAGAACAAGTAAAAGTGAAAATAGTGTCAAAAACTTTTGCA
AGAACAGAGAAAATAAAAAACCCAAACATAAAGGGACAGCGAGTTTGCATCATCAATAACGGTCCAACGGAAACAAAACTACAAAT
CCATAAAACTACAAATCCATAAGAGACGGTAAATAAAAAACGCTACAACTAAATCACTCTTCCACAATATGAATCTAATAAAGCAC
TTCAATAGCTTCATTCTTCAACAGCGATCTTGCCCTTCTCGCTCACATAGATACCATCAAGGAACTTCCTAATATCCTTCTTCTTC
ACATGGCATTTCTGATTAATCAGAGCGCAAGAACGCGAGACAAGCTCGATATCATTACCCTCAAGAGTAATCTCATCCTTGACTTT
CTCAGACCGAACAATGGTAACACCATCCAACATATCAACCTTCCTGACCTTCTTCTCGCCGAGGAAGTTACGGATCTCGATGGACT
TGTTGTCGCCGGAGATGGAAGCGTTGATGGGGAAATGAGCATACACGAACCTCATCTTGTAAAGGAAACCCTGAGTGACGCCAGCG
ATGAGATTGCTGACGTGGCTCAGAGCGGTTCTGATCGAGGCGCTGGCCTTGCGAGGGCCGAACCACGAGTCGATCTTGAGCTGTCG
CTTGCCCGTGACGTCGTCTTTGATGAGCTGGAAATCGAGGTTGAGATGCTTGAAGTCGCGAGTGAGCTTCCCGCGTGGGCCTTCCA
CTTCGTTCACCTTGGCGTGGACCTTGATGGAGACGCCTTCGGGGATGTCCATGGTCTCGGATGATAAGATCGTCTTCATCTTTCGT
CTCTCGAGAGTGTGTGAAATGCCGACGGCGGTACTTCGGTATAGAAATTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874628 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata] | 911 | 5e-096 |
| NP_192783 60S ribosomal protein L9-2 [Arabidopsis thaliana] | 909 | 8e-096 |
| NP_564417 60S ribosomal protein L9-1 [Arabidopsis thaliana] | 868 | 5e-091 |
| XP_002891031 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata] | 867 | 6e-091 |
| AAM63736 ribosomal protein L9, putative [Arabidopsis thaliana] | 864 | 1e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZX9 60S ribosomal protein L9-2 | 909 | 4e-097 |
| P49209 60S ribosomal protein L9-1 | 868 | 2e-092 |
| P30707 60S ribosomal protein L9 | 824 | 3e-087 |
| P49210 60S ribosomal protein L9 | 747 | 2e-078 |
| Q3SYR7 60S ribosomal protein L9 | 522 | 3e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCC2 Ribosomal protein L9, putative | 864 | 9e-091 |
| Q38M76 Putative uncharacterized protein | 842 | 3e-088 |
| Q307X4 Putative uncharacterized protein | 839 | 7e-088 |
| B9RYZ1 60S ribosomal protein L9, putative | 827 | 2e-086 |
| B7FN14 Putative uncharacterized protein | 819 | 2e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G10450.1 60S ribosomal protein L9 (RPL90D) | 910 | 3e-098 |
| AT1G33120.1 60S ribosomal protein L9 (RPL90B) | 869 | 1e-093 |
| AT1G33140.1 PGY2 (PIGGYBACK2); structural constituent of ribosome | 869 | 1e-093 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
