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Information for unigene UN51502
| FASTA Sequence |
| Unigene ID: UN51502 | Length: 838 |
SSR | | GAAGATTCAAAAAAGTGAAATAGGTAAAAGGAATAGCAAATTGTGTCTCCAAAAACTTCTGCATAAAGTAAATAAAAATCTCGAAC
AAAAAGACAAGGGATAAGCCGAGTTTTGCAACACCGGTGAGATTTTGGTCTGAAAAACAAACTAAACATTCAAAAGATGAAGGAGA
CATATTTGTCTATTCCTCTTCAACGATCTTGCTCTTCTCGCTAACATAGATACCGTCAAGGAACTTCCTGATATCCTTCTTCTTCA
CGTGACATTTCTGGTTGATAAGAGCGCATGACCTTGAAACAAGCTCAATGTCATTTCCATCAAGAACAATCTCATCCTTGACTTTC
TCCGACCGAACAATGGTTACACCATCCAACATATCTACCTTCCTCACCTTCTTCTCCCCAAGGAAGTTACGGATCTCAATGGACTT
GCTGTCACCGCCGATGGAAGCGTTGATGGGAAAATGAGCATACACAAACCTCATCTTGTACCTGAACCCTCTGGTGACACCAGTGA
TGAGGTTATCGACGTGGCTAAGAGCGGTTCTGATGGATGCACTTGATTTGCGAGATCCGAACCACGAGTCGATCTTCAGCTTCTTC
TTCCCGGTTTCGGCGTCCTTGATGAGCTGGAAATCGAGGTTGAGACGCTTGAAGTCGCGAACAAGTTTGCCGCGAGGTCCTTCGAC
TTCGATCACCTTAGCGTTAACTTTGATGGTAATGCTTTCGGGGATATCCATCGTCTCGGAAGAAAGGATCGTCTTCATCTTCTCCT
CACGTTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGCTCTCGCTCTGTTTTAGGCTCAGGGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_564417 60S ribosomal protein L9-1 [Arabidopsis thaliana] | 934 | 9e-099 |
| XP_002891031 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata] | 931 | 2e-098 |
| AAM63736 ribosomal protein L9, putative [Arabidopsis thaliana] | 930 | 3e-098 |
| NP_192783 60S ribosomal protein L9-2 [Arabidopsis thaliana] | 863 | 2e-090 |
| XP_002874628 60S ribosomal protein L9 [Arabidopsis lyrata subsp. lyrata] | 863 | 2e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P49209 60S ribosomal protein L9-1 | 934 | 4e-100 |
| Q9SZX9 60S ribosomal protein L9-2 | 863 | 7e-092 |
| P30707 60S ribosomal protein L9 | 852 | 1e-090 |
| P49210 60S ribosomal protein L9 | 755 | 2e-079 |
| Q90YW0 60S ribosomal protein L9 | 535 | 8e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8LCC2 Ribosomal protein L9, putative | 930 | 2e-098 |
| Q307X4 Putative uncharacterized protein | 861 | 2e-090 |
| Q38M76 Putative uncharacterized protein | 861 | 2e-090 |
| B7FN14 Putative uncharacterized protein | 853 | 2e-089 |
| C6T017 Putative uncharacterized protein | 843 | 2e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G33120.1 60S ribosomal protein L9 (RPL90B) | 935 | 3e-101 |
| AT1G33140.1 PGY2 (PIGGYBACK2); structural constituent of ribosome | 935 | 3e-101 |
| AT4G10450.1 60S ribosomal protein L9 (RPL90D) | 864 | 5e-093 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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