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Information for unigene UN51508

FASTA Sequence
Unigene ID: UN51508Length: 624  SNP
CACACAACATCACAAGCTTGATAAAGAGAAATAACTTTCTAAGAGAAAAATCTTAAAACTTCACTCTTTCAACAATGGCTTACTCT
AAGATTGCTCTTCTCCTTGTTTTGAATGTCATCTTCTTCACTTTGGTCAGTTCTACGGCCCCTTGTTCACCACCACCGCCCAAAAG
CCACGACAAGAAACCCTCACCGTCGTCTCCTTACACCAAACCCAGTTGCAAAGATGCTCTTAAACTCAAGGTATGTGCCAACGTGT
TGAATTTGGTTAAGGTTTCTCTACCAGAAAAGGCCGAATGTTGCGCCCTTATCAAAGGTCTAGTTAATCTCGATGCTGGGGTCTGT
CTCTGCACCGCTTTGAAGGCTAATGTCCTTGGCATTAATCTTCATGTTCCTATTTCACTGAGTGTTCTCCTTAACCAGTGTGGTAC
GAAGGTTCCATCTGGTTTCCAATGTGCTTAGAGATAGCACGTTATTAAATCGATGTTCTAAATTATCACTTGAATACGATTGTTGT
TTTAAAATTTCGTGTACTTTTCAAATTTTCTTGTTTTATTCTACTATTATCTATTGTTTGTAATCCGCTACATGTTTTATTGATGA
AATAATTAAGGTGTTTTCATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199501 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]5171e-050
AAM62750 extA [Arabidopsis thaliana]5072e-049
NP_199500 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]5001e-048
XP_002863385 hypothetical protein ARALYDRAFT_494287 [Arabidopsis lyrata subsp. lyrata]4847e-047
NP_566036 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana]3565e-032

Swiss-Prot top hits (Blast detail)Scoree value
P14009 14 kDa proline-rich protein DC2.153331e-030
Q01595 Cortical cell-delineating protein3071e-027
Q00451 36.4 kDa proline-rich protein2156e-017
P24337 Hydrophobic seed protein1304e-007

TrEMBL top hits (Blast detail)Scoree value
Q39100 ExtA5178e-051
Q8LEB0 ExtA5071e-049
Q9FJS1 Extensin-like protein5007e-049
A2PZD7 Extensin like protein3564e-032
Q42044 At2g451803564e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G46900.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein5231e-053
AT5G46890.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein5061e-051
AT2G45180.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3572e-034
AT1G12090.1 ELP (EXTENSIN-LIKE PROTEIN); lipid binding3322e-031
AT4G22460.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3105e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  27%
 
96  55%
 
122  18%

Unigene MembersMember information