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Information for unigene UN51514
| FASTA Sequence |
| Unigene ID: UN51514 | Length: 1286 |
SSR | | GGATCAACTCATCATCATCAACCTAACTAGGACAATGGCGGCTATGGCTTCTCACGTCTCGGCGTCCACCACTCTCACTCGCTTCT
CCGCCGTATCACTCTCTTCTCCGGCGACCTTCTCCTCCCTCCGCCTTCGTGTCTCCTGCCAAGCCTCCTCCGTCACTTCCCCCACA
ACTTCCGATGTGAAAGGAAGTTGTGACCTGAAAGACTTTCTGGCCATAGATGATTTTGACACAGAGACCATCAAAAAGATTCTCGA
CAAGGCCTCAGAGGTCAAGGCCCTGTTGAAATCAGGTGAGAGGAACTATCTGCCTTTCAAAGGCAAGTCTATGTCTATGATCTTCG
CAAAGCCCTCCATGAGGACTCGTGTTTCCTTCGAGACTGGCTTCTTCTTGCTTGGTGGACATGCCTTGTATCTTGGTCCCGATGAC
ATCCAGATGGGCAAGAGGGAGGAGACTCGCGACGTTGCTCGTGTCCTGTCGAGATATAATGACATCATTATGGCCCGTGTCTTTGC
TCATCAGGACATTCTTGATTTGGCTAACTACTCGAGTGTGCCTGTTGTCAATGGTCTGACAGATCATAACCATCCTTGTCAGATTA
TGGCTGATGCCCTCACAATCATTGAGCACATTGGTCAAGTCGAAGGGACAAAGGTTGTTTATGTTGGAGATGGGAACAATATGGTT
CACTCATGGTTAGAATTGGCATCAGTTATTCCTTTCCACTTCGTCTGCGCTTGCCCAAAAGGGTTTGAGCCAGACAAAGAGAGAGT
TCTAAAGGCAGAACAAGCTGGTTTAAGTAAGATAGAGATCGTGCATGATGCTAAAGAAGCTGTGATAGGAGCTGATGTTGTGTACT
CAGACGTATGGGCCAGTATGGGCCAAAAGGATGAAGCTGAATACCGCCGAAAAGCATTCCAAGGATTCCAGGTGGATGAAGCTCTT
ATGAAGTTGGCTGGACCAAAAGCCTATTTCATGCATTGTTTGCCTGCAGAAAGAGAAGTTGAGGTGACCAATGGAGTCGTGGAAGC
TCCTTATTCCATTGTCTTCCCACAGGCTGAGAATCGTATGCATGCTCAAAATGCTATAATGCTTCATTTGCTTGGCTTTTAAACCC
CTTTTTGTTATCTTAGCTCTCTCTCTCTCTCACGTGTTTACTGGTGTGTCATTGACTTTGTGTTGTTGTTAACCTTAGTGTGAGGA
ACCTTGATGAATAATATTGTGGATGGTCTAGCTGGGAATAAGAATGAGCTTCTTTTTATATAATGCTAGATTATGATTTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889019 hypothetical protein ARALYDRAFT_476678 [Arabidopsis lyrata subsp. lyrata] | 1648 | 3e-181 |
| NP_177667 ornithine carbamoyltransferase [Arabidopsis thaliana] | 1632 | 2e-179 |
| BAH57202 AT1G75330 [Arabidopsis thaliana] | 1600 | 1e-175 |
| CAA04115 Ornithine carbamoyltransferase [Arabidopsis thaliana] | 1594 | 5e-175 |
| XP_002281919 PREDICTED: hypothetical protein [Vitis vinifera] | 1443 | 2e-157 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O50039 Ornithine carbamoyltransferase, chloroplastic | 1632 | 9e-181 |
| Q43814 Ornithine carbamoyltransferase, chloroplastic | 1353 | 2e-148 |
| Q5JI16 Ornithine carbamoyltransferase | 770 | 8e-081 |
| O93656 Ornithine carbamoyltransferase | 763 | 5e-080 |
| O58457 Ornithine carbamoyltransferase | 762 | 7e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z3C3 AT1G75330 protein | 1600 | 7e-176 |
| B9R7X3 Ornithine carbamoyltransferase, putative | 1427 | 8e-156 |
| A9P9Z5 Putative uncharacterized protein | 1391 | 1e-151 |
| B9H4D4 Predicted protein | 1387 | 4e-151 |
| B9V280 Plastid ornithine carbamoyltransferase | 1305 | 1e-141 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G75330.1 OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ ornithine carbamoyltransferase | 1633 | 6e-182 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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