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Information for unigene UN51553

FASTA Sequence
Unigene ID: UN51553Length: 1034 SSR 
GGATCTCTCTCTCTCTGGAAAAAGGATCGTGCACCTTTCAAAAACCCTAGATTACACAAAAAGAGATTAGGTTCCGAATCCTCTCC
GGCGATCATCCTCGATTGAAATTGGGATCACGGTTACAAAGATTGGTCTACTCTGTGTTGAGAGATGAGCTCACAAGAGTCTAGAA
CAGCAAGCCGAGGGATTCGACGGAGGAAAGCTGTGATTGATCTGAACGAGGTACCCTGAGATCACGAAGGGACGACCTCCTCCGCT
TCCATGAGAGAAGCTCCTCCTACGGTGGTGCCTACTGTACCTTCTCAGCCTGTTCCTACGATGATTGATGTCGATGCTATTGAAGA
TGATGTTATCGAGTCATCCGCAAGTGCCTTTGCTGAAGCTAAGAGCAAATCAACAGGTGCACGTCGGAGGTCGTTGATGGTTGATG
TAGAGTCAGGTGGTTTGACGAGATTGTCTGCCAACAAACGCAGAAGGATTCCTCCTAACCAACCTGTCATCGACTGTGAGCATGTC
TCTGTAGATGTGAGAGAGTCTAGCCCAAAGCCTCCACCACCACCACCAGAGGAGCCAAAGTTTTCTTGTCCGATTTGTATGTGCCC
GTTCACCGAGGAGACGTCAACCAAATGTGGTCACATCTTCTGCAAGGGATGTATAAAGACGGCAATATCTCGCCAAGCCAAATGCC
CTACTTGTAGGAAAAGGGTGACTGTTAAAGAGCTGATTCGCGTATTCCTTCCAACCACCAGATGATTTATACATCAACTGTCACCA
GTCACCTTGTCTAACAGCTCTATCCTCGAATTCGCTTTGGAACATTTGGAGGGAGTACAGTGACTTGTGTTTTAGATTGAATGTTT
CACTTTATTGGAAGAGAAATATTCATTGTTTAAGAAGGCCCTATCATTTTATGGATATCATTGGTAATATTGGATTTGTTCTGTTT
CCTAGTTGTTGTTTATGTAATTTAGGTACCTGCAAACATCTCAGACGATGCCTTACTCTCTGATAGATGAAAAATATATATATGGA
TG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865657 hypothetical protein ARALYDRAFT_494930 [Arabidopsis lyrata subsp. lyrata]7395e-076
AAM61659 unknown [Arabidopsis thaliana]7252e-074
NP_568701 RING/U-box domain-containing protein [Arabidopsis thaliana]7191e-073
AAK76707 unknown protein [Arabidopsis thaliana]7092e-072
XP_002301799 predicted protein [Populus trichocarpa]5228e-051

Swiss-Prot top hits (Blast detail)Scoree value
Q9CQ29 RING finger protein 1511343e-007
P78317 RING finger protein 41309e-007
Q9QZS2 RING finger protein 41309e-007
O88846 RING finger protein 41309e-007
Q5KB05 Pre-mRNA-splicing factor CWC241245e-006

TrEMBL top hits (Blast detail)Scoree value
Q8LF11 Putative uncharacterized protein7252e-074
Q8GS41 Putative RING zinc finger7198e-074
Q94AH4 Putative uncharacterized protein At5g48655/K15N18.13 (Fragment)7091e-072
B9GQL0 Predicted protein5225e-051
B9IBA6 Predicted protein5136e-050

Arabidopsis top hits (Blast detail)Scoree value
AT5G48655.2 zinc finger (C3HC4-type RING finger) family protein7203e-076
AT5G48655.1 zinc finger (C3HC4-type RING finger) family protein7203e-076
AT5G48655.3 zinc finger (C3HC4-type RING finger) family protein7203e-076
AT3G07200.1 zinc finger (C3HC4-type RING finger) family protein4499e-045
AT3G07200.2 zinc finger (C3HC4-type RING finger) family protein4499e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
211  33%

Unigene MembersMember information