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Information for unigene UN51594
| FASTA Sequence |
| Unigene ID: UN51594 | Length: 610 |
SSR | | GGGCGACGGAGAGAGAGAGAGAGAGGGAGAGAGGCGATGGATGCTCGATCTGTTTTTGTTGGCAATGTTGATTACGCTTGTACACC
TGAAGAAGTGCAGCAACATTTCCAATCATGCGGCACAGTCCACCGAGTGACAATTCTGACAGACAAGTTCGGGCAGCCAAAGGGGT
TCGCTTATGTCGAGTTTGTGGAAGCTGAAGCTATACAAGAGGCGCTACAACTGAACGAATCAGAGTTACATGGTCGTCAGATAAAG
GTGATGCCTAAGAGAACAAACGTTCCTGGATTGAAACAGTTCCGCGGTAGAAGATTCAACCCGTACATGGGCTTCCGCAGACCTTT
CATGTCTCCGTATATGTATTCTCCATATGGATATGGGAAAGTTCCAAGGTTCAGAAGGCCAATGCGTTACATGCCATATCAATAAA
ACCATCATGGCTGCTTTATATCCATCCATTGTTTGAGCTTTCAATGACTTCTCGCTCTCTTTGTTTAAGAACTTTGCAATCTTGAA
TTGTTTTACAAGTTTCATATCGTTTGGATCAGTGATGATACATTTTTGTTATGTGTTACATTATGCGGATGGGTTTAATATCAGTT
GAAATTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABL97957 poly(A)-binding protein II-like [Brassica rapa] | 680 | 1e-069 |
| NP_201329 RNA recognition motif-containing protein [Arabidopsis thaliana] | 675 | 5e-069 |
| XP_002866661 polyadenylate-binding protein family protein [Arabidopsis lyrata subsp. lyrata] | 670 | 2e-068 |
| XP_002531675 poly-A binding protein, putative [Ricinus communis] | 624 | 4e-063 |
| ACJ84516 unknown [Medicago truncatula] | 618 | 2e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O14327 Polyadenylate-binding protein 2 | 315 | 1e-028 |
| Q9DDY9 Polyadenylate-binding protein 2-A | 292 | 6e-026 |
| Q7ZXB8 Polyadenylate-binding protein 2-B | 291 | 8e-026 |
| Q6NVP7 Polyadenylate-binding protein 2 | 286 | 3e-025 |
| Q28165 Polyadenylate-binding protein 2 | 283 | 7e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YMZ8 Poly(A)-binding protein II-like | 680 | 9e-070 |
| Q9FJN9 Poly(A)-binding protein II-like | 675 | 3e-069 |
| B9T0A6 Poly-A binding protein, putative | 624 | 3e-063 |
| B7FID7 Putative uncharacterized protein | 618 | 1e-062 |
| B9H4R7 Predicted protein | 612 | 7e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein | 676 | 2e-071 |
| AT5G10350.1 polyadenylate-binding protein family protein / PABP family protein | 611 | 6e-064 |
| AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein | 529 | 2e-054 |
| AT5G51120.1 PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding | 517 | 5e-053 |
| AT3G55460.1 SCL30; RNA binding / nucleic acid binding / nucleotide binding | 133 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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