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Information for unigene UN51666
| FASTA Sequence |
| Unigene ID: UN51666 | Length: 941 |
SSR | | GTCAACCATTTTCTTGGAACATGTTTTCTTCTTGCCTTTAGATTTCTTATTCATTACATAAAAACAACAACAACAACGTGGAAGAC
AACATATATAACTCCAGCACACATCATACAAAATATGAAGATAGTTAAGCTACTGATGGAGATGGGATCATTCCCATCTTCCTCGC
ATAAGCAAAGATACCACCAGCATCAATAACAGGTCCGGCATCACCGATCGCCTTCAGCTTATACTGCTTACCGGTTGTGTGATTAG
TCAGTAAACCACCACTATCCCTCAGCTCGATCGTCACCGTGTCTCCTGTCGTACACTCGTCGCAGACTCTAACATCTGATTCGAGG
GGAAACACCTCTCCCGTAGCCACCGAGTTACGGAAAAAGATCCTCGCGTAAGTCTGAGCAACAACGGCTTTAGCTCCTGCTGCTCC
TAGACAGACAGGAGCGTGTTCACGTGAGGACCCGCAACCAAAGTTTTCACCGGCGACTATGATGGAATATTTAGATTTGATCTCTC
CTGGCTCAACGAAGCGGGGTTTGTGGGAGTCTGGTAGACCGGAGAGGGCGTTAGAGCCGATCTCGTCACGTTCTTGCTGGTTGGAA
GGGAAAATGCACGCTTTGTCTGCTGGGATGATCTGGTCGGTGTCTATGTTGTCTTTCAAGACGAAGCATAGACCGTGGAAGGTGGT
TTTGGCTAGCGAGTCGGATCCCTCGGAGGAGGAGGGAGTGGCGCGTGGGATGATGAAGGATGCGCGACGTGAAGAGAGGGAGATAG
ATGATGGGAGGAAGTAAGCGGAACTGGTGATCTTGAGGGAAGGAGATCGGAAGGGAACGAAGGAGGGAGAAGTTTTGCTTGATGAA
GAAGGTAAGACTCTGGAGAATGTAGGTAGAGAAGACGTCATTTGTGTGTGTTTGGGCTCTACTATCGAAGTTGTTGTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181838 isopropylmalate isomerase 2 [Arabidopsis thaliana] | 1002 | 1e-106 |
| XP_002880024 aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 991 | 3e-105 |
| XP_002880023 aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 799 | 5e-083 |
| NP_181837 Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] | 794 | 2e-082 |
| XP_002878250 aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 786 | 2e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B5YHE5 3-isopropylmalate dehydratase small subunit | 260 | 7e-022 |
| Q9UZ06 3-isopropylmalate dehydratase small subunit 1 | 245 | 4e-020 |
| Q8U2A0 3-isopropylmalate dehydratase small subunit 1 | 236 | 4e-019 |
| Q8TX94 3-isopropylmalate dehydratase small subunit 1 | 235 | 6e-019 |
| Q30RK1 3-isopropylmalate dehydratase small subunit | 233 | 9e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZW84 3-isopropylmalate dehydratase, small subunit | 1002 | 1e-106 |
| Q9ZW85 3-isopropylmalate dehydratase, small subunit | 794 | 1e-082 |
| Q9LYT7 3-isopropylmalate dehydratase-like protein (Small subunit) | 771 | 6e-080 |
| B9SXE3 3-isopropylmalate dehydratase, putative | 714 | 2e-073 |
| A9PJA7 Putative uncharacterized protein | 699 | 1e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G43100.1 aconitase C-terminal domain-containing protein | 1002 | 6e-109 |
| AT2G43090.1 aconitase C-terminal domain-containing protein | 794 | 8e-085 |
| AT3G58990.1 aconitase C-terminal domain-containing protein | 771 | 4e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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