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Information for unigene UN51684

FASTA Sequence
Unigene ID: UN51684Length: 1496 SSR 
AATTACTGAACTTAAGTAGGTGTTTTATAAAAAATATAACTGATACACGCCTCAGGATGTCAAAAAAAAAAATTACATCTATATAT
ATATAACTGCTTATCATTTGTAACTGATTAAATTGAGTGGGGGGAGGGGGCTAATTAATATAAAAAGGAAAAACAATTAGATGCAG
TTAGAGAATTAAAGTAATCCCGAGTTTTATGGTTCTCGAAGTGGTGGTTACAAAAAATATATTTAGATGCAGTTAGGAAATATAAA
GTTTATTTTTTGTGTATGTATTGTTGAAAAAATTAGTTGGACACAACCTCATATCAATTGGTCATGCTGGAGAATTAATAGAATAG
ATGATGGAGGGAACCCCTTTCTTTCTTCCTAATCAAGAAACGTTTAACTTTAAGGGTTCCTCTTCTTTCTTTTTTTTTGTATTTTC
GCTGGCATTTCTTCTGATACTAATCCTAACGATGAAGCTGATCTCACCACTCGATGATGGTGCTTCTTGTAAAACAGAAGAAAAAA
ATGGGGAAGTGCAATCCGTAGTTGCAATATCAAGCTTGGGAAAGCTCGATTTCCGCATTCAAATTGCTCCTTTCTTTATCTTCATC
ATCGTCTTTCCAGTTAGTTGTTTTATAGTAAAGTGCGTATAATATAAATTGTATTGTTCCTGATAGGCATCCAAGAGCATTTGGGA
TCAAAATATAGAGGTCGAATTTAAGACATGCATAAACGATCCAAATGGCTCCGTTCATGAAGTTGGCTAAAGACAAGAGGAACGGC
ATGTACTTCACGCTCTTTGTCTTTATCACAAGTGCCATGACGGTTAAAGGCGAAGCATACATGATAATATTGAAAATAATGCACAA
GATCCCAACAAGCATAGATCTCTGTTTTGTTGTATGCAAAAAATACAATGTGCAGAAGACGACCACAGCCATGAATATCACCTCAA
TTACCATAGCTATTGCGATCCTTTTACGGACAGGCGAGGTAGCGAAGATGAAGAAGATGATGACATAAACGAGTTCCATGACAAGA
CCAGCTCCGTTAATGGTGATGACGAGGAGACTGTCGGGTTGGACGAAAGGAAGTCCGTAAAAGGTCCACATCATGCAGTTTAAAAC
AGTAGCTACGTAAGGATCTGGCTTAAATTCAGATACCGATTTCATCTTCCATATCTCACCATCGTTGGTATTGGAGCCGAGAACAA
GCCGAAGGCGATAACGTTTCCGATGATTCCGACGATCGTCCGGGCAGTGTTGGTGTCCGTCATGTTGCTATATATCTCCACGAATT
CTTGTCTTTTTATAAATTTTCTCAAAAATCTAGATTTCTAGAGAAAAAAGATATTAGATTAATTAATTCGATTATTCTTTATATAT
AAAAGATATTTCTTTAGAGTCTTGTCAATTTTTGTTTCTGATATGTGATAAGTTAGGTTTGATTGATGAAACAACTCCTTTTTTGT
TTTTTCCTAGTATTTGATTATTTTTGGTTTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201091 nodulin MtN3-like protein [Arabidopsis thaliana]9388e-099
XP_002866519 hypothetical protein ARALYDRAFT_496468 [Arabidopsis lyrata subsp. lyrata]9315e-098
BAB10854 unnamed protein product [Arabidopsis thaliana]7702e-079
CAE47557 seven-transmembrane-domain protein 1 [Solanum lycopersicum]7058e-072
XP_002283068 PREDICTED: hypothetical protein [Vitis vinifera]6941e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14446e-043
Q5EAL3 RAG1-activating protein 1 homolog2341e-018
Q6NTJ7 RAG1-activating protein 1 homolog2322e-018
Q290X1 RAG1-activating protein 1 homolog2242e-017
Q5EB14 RAG1-activating protein 1 homolog2081e-015

TrEMBL top hits (Blast detail)Scoree value
Q9FM10 Similarity to MtN3 protein7702e-079
Q70ET6 Seven-transmembrane-domain protein 17055e-072
B9RB45 Putative uncharacterized protein6582e-066
Q944M5 At3g28008/At3g280086544e-066
Q8LD36 Contains similarity to nodulin MtN3 protein6501e-065

Arabidopsis top hits (Blast detail)Scoree value
AT5G62850.1 AtVEX1 (VEGETATIVE CELL EXPRESSED1)9392e-101
AT3G28007.1 nodulin MtN3 family protein6542e-068
AT4G10850.1 nodulin MtN3 family protein5306e-054
AT1G66770.1 nodulin MtN3 family protein4948e-050
AT5G40260.1 nodulin MtN3 family protein4445e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  25%
 
121  25%
 
61  25%
 
91  25%

Unigene MembersMember information