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Information for unigene UN51717
| FASTA Sequence |
| Unigene ID: UN51717 | Length: 1333 |
SSR | | GGGTTTCCGTTAAAGCAAAAAAAAAAAAATGAATGTTCTTCTTCTTCACATCTCACTCTTTCTTCTTCCACTACTGCTTCAGCAAG
AGCCATCTTCCTCCGCCATTATACTGAGCTTGAAGAAACGCCATGGGAGCAGCAGCGGCAGCAGCAGCAGCAGTGGGAACCAGTAC
AGCTCGAGCAGACCTTCTTCTTTCCAAGGGAACAGAAGCACGTGCTCTCTCTTCATGGGCACGTGGGTCCACGACGACTCGTACCC
TCTGTACAAACCGGCGGATTGTCCCGCCGTCGTGGAGAGTGAGTTCGATTGTCAGATGTACGGACGTCCTGACTCCAACTACCTCA
AGTATCGATGGCAGCCCCAGAATTGCAACTTGCCCACGTTCAATGGTGCTGAGTTTCTGTTGAGAATGAAGGGGAAGAACATAATG
TTTGCGGGTGATTCGTTGGGGAAGAATCAATGGGAGTCGTTGATCTGTCTCATTATGTCATCTGCACCCTCCACTCGTACTCAAAT
GACCAGAGGTCTCCCTCTCTCCACCTTCAGATTCTTGGACTATGGGATAACTATGTCGTTTTACAAAGCTCCTTTCTTGGTGGACA
TAGACGCTGTTCAAGGCAAGCGTGTGTTGAAACTTGAGGAGATCTCTGGCAATGCCAACGCTTGGCATGACGCTGATCTACTCATC
TTCAATACTGGTCACTGGTGGAGCCACACCGGGTCTCAGCAAGGATGGGACTTGATTCAATCAGGCAATTCTTATTACCAAGACAT
GGACCGTTTCGTTGCTATGGAGAAAGCTCTTCGTACTTGGGCTTATTGGGTTGAAACACATGTGGATAGATCCAGAACTCAAGTCT
TCTTCCTCTCTATTTCTCCAACACATGACAATCCGAGTGACTGGGCAGCATCAACGTCTTCGGGATCCAAGAACTGCTACGGAGAG
ACGGAGCCAATCACAGGAGCGGCTTATCCAGTGAGTCCCTACACAGATCAGCTAAGATCGGTGATCGTTGAAGTGCTTCACGGGAT
GCACAATCCTGCATTACTTCTTGACATAACGCTCCTCTCTTCCCTCAGAAAAGACGGACACCCTTCTGTTTACAGCGGTCTTGTTA
GCGGTGGTTCACAGCTGGCCAAGCCAGGCCAGTCAGATTGTAGCCATTGGTGCTTGCCTGGTCTCCCTGATACATGGAATCAGTTG
TTGTATACCATTCTCTTCTATTAGCCCACCCTTTTATTATCTTTTTCTATCAATTTATTCGGGTAGGATATTTTTCTAACGCATTC
GAGGAGAATCCCCAAGTTTATGGATGCATTCAATTGTAGGAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34605 unnamed protein product [Thellungiella halophila] | 1928 | 1e-213 |
| NP_200668 uncharacterized protein [Arabidopsis thaliana] | 1874 | 2e-207 |
| AAM62736 unknown [Arabidopsis thaliana] | 1871 | 4e-207 |
| XP_002866280 hypothetical protein ARALYDRAFT_495984 [Arabidopsis lyrata subsp. lyrata] | 1869 | 7e-207 |
| NP_974961 uncharacterized protein [Arabidopsis thaliana] | 1345 | 4e-146 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUZ6 Genomic DNA, chromosome 5, P1 clone:MZN1 | 1874 | 1e-207 |
| Q8LEB9 Putative uncharacterized protein | 1871 | 3e-207 |
| Q3E895 Putative uncharacterized protein At5g58600.2 | 1345 | 3e-146 |
| B9HNE1 Predicted protein | 1308 | 5e-142 |
| B9GGP4 Predicted protein | 1254 | 1e-135 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58600.1 PMR5 (POWDERY MILDEW RESISTANT 5) | 1875 | 5e-210 |
| AT5G58600.2 PMR5 (POWDERY MILDEW RESISTANT 5) | 1345 | 2e-148 |
| AT2G30010.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: PMR5 (POWDERY MILDEW RESISTANT 5) (TAIR:AT5G58600.1); Has 709 Blast hits to 698 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 709; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 1093 | 3e-119 |
| AT2G30900.1 unknown protein | 865 | 7e-093 |
| AT2G34070.1 unknown protein | 800 | 2e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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