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Information for unigene UN51732
| FASTA Sequence |
| Unigene ID: UN51732 | Length: 1137 |
SSR | | ATTCTACGTGCGAGTGTCGTCTTCTCTACTCTCTTCCTCTCTCTCTCTCTCGCATTAGATCACTCCGTTGACTTTGCTTCCACTCG
GAGAAGATCTGTGGTTTCGGAGATTTGTAGCTGATTCGCTGTTGAAGCTAACTCGGCAGCCATGAGCTCGGTTTTGCAGGGTTTTA
CGAAGTCACTCGCCATGACTTTTGTGTCGGAGATTGGGGACAAGACCTTCTTCGCCGCCGCTATTCTGGCGATGCGTTATCCAAGG
AGACTTGTGTTGGCTGGTTGTGTATCTGCTCTGATTGTCACGACTATCCTCTCTGCTGCCATTGGATGGGCTGCTCCTAATCTGAT
CTCTCGCAAATGGACCCATCACATAACGACCTTGTTGTTCTTTGGTTTCGGGCTATGGTCTTTGTGGGACGGTTTCACAGAAGAAG
GAGGGGATTCTGACGAATTGGCCGAAGTGGAAGCAGAACTGGATTCTGATTTGAAGGCTAATAATGGCAAGACTACAAAAGATAAC
AGTAAGATTGAAGATGAAAACAAGAAGAAACAGAAAAGGCCATTCCTCACACAATTCTTCTCTCCTATTTTTCTCAAGGCCTTTTC
GATTAACTTCTTTGGTGAATTTGGTGACAAGAGTCAGCTTGCTACAATTGGTTTAGCCGCTGATGAAAACCCGTTTGGGGTTGTCC
TTGGTGGAGTTGTGGCACAGCTTGTGTGTACCACTGCTGCTGTGATTGGAGGAAAGAGCTTAGCTTCTCAGATATCCGAACGAATA
GTAAAATATCTCTCCTTATATAATCCCTTTTTGAGAGAAAGACTAGTTTAAGTTTATATAAATGTTGTTGTTGTGATTGCAGGTTG
CTCTTTCTGGTGGAATGCTATTCATTATATTTGGCATCCAATCGTTTCTTACTTCTGTTGAGGCCTAATGCTTCTTTCTGGGTTGT
AGGGAGAGCTGAAGATGACGATGAAGAACTTTGCTATCTATACTTTCTTTAGATTTGTAATCTTTGATACTAGATGTTTTACGCAA
GTCATTACAAAACAAATCGGAAAGTTTATTTAACCTTGAAAAAAACATTAAAAGGGGCGCTGAAGCAGCCATTTGACTTCAATAAA
GTTCTGGTAATCTTTGGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173923 putative transmembrane protein [Arabidopsis thaliana] | 940 | 3e-099 |
| XP_002893419 hypothetical protein ARALYDRAFT_335795 [Arabidopsis lyrata subsp. lyrata] | 940 | 3e-099 |
| AAM65603 transmembrane protein, putative [Arabidopsis thaliana] | 937 | 7e-099 |
| XP_002887196 hypothetical protein ARALYDRAFT_475991 [Arabidopsis lyrata subsp. lyrata] | 917 | 1e-096 |
| NP_177032 UPF0016 protein 5 [Arabidopsis thaliana] | 897 | 3e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4V899 Transmembrane protein 165 | 367 | 4e-034 |
| Q9HC07 Transmembrane protein 165 | 365 | 6e-034 |
| P52875 Transmembrane protein 165 | 364 | 8e-034 |
| P38301 UPF0016 membrane protein YBR187W | 190 | 1e-013 |
| P52876 UPF0016 membrane protein sll0615 | 173 | 1e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C6M1 Putative transmembrane protein | 940 | 2e-099 |
| Q8LA33 Transmembrane protein, putative | 937 | 5e-099 |
| Q9SX28 At1g68650 | 897 | 2e-094 |
| B9ST29 Transmembrane protein TPARL, putative | 856 | 1e-089 |
| B9N257 Predicted membrane protein | 830 | 1e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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