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Information for unigene UN51815
| FASTA Sequence |
| Unigene ID: UN51815 | Length: 762 |
SSR | | GGAGTGTTGTGTTGTTAAGCTCTTGTCTCTTCCGTCTCGGACAACTTCGCTCCTCGGGCAATAGGTGTACTTTATTAAGTTTCTGT
AGATCTTTTTCTCATGGGGGACTCAGAAGACGCTAGCCAACCTTCAAAGAAGAGAGGTGCCTTGAAGCAGCTGTCCCGTGAGAATC
CAGACGATGATGATGATGACATTGGTTCAGCTGAACTTGAGAGTGGAACTTTCAAGAAGGCCCCTGATGAGGTCTTGGCGACTAGA
AGAATTGTCAAAGTCAAGCGCAAAGACCCATCATCTGCTGCACCACCATCAGCCGCTGCAGCTTCCAACCCTTTCGCTGGGATTCA
ATTGCTCCCTCCTACCGCTGTGGGAACAACAAATACACCTCTGCCTGAGTCTAAAGTGGCTCCAGCGGAAGCTGTAGTGGAGGACA
ATCAGAAGGCAGCTGCTGATACTGAAGACGGTGATGACGTTGACAGTAATAAGAAGGTTGATGTCAAAGATTCTGCTGGGAAGAGC
TTGAAAAGACTAAAGATAAGGATGATGATGCTGGTGTAGACCAGACCGTCTCGGGTGTTAGCAACGCTGTGGAAGGAACTGATCAA
ACCGAGGATCCTCTTGAGAAGGGGGAATCAGGAGGTGATCAGACTGAGAGAAAAGAAAAAGAAGGCGAAGCAAGCGTTGAGGCAGA
ATCAGCAGAGAAGAACGGTGATAATAATAATAATAATGGCTCCTTGAGTTCGTTCCAGCAGCATTCAAGTAGCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564606 nucleoporin 50 protein [Arabidopsis thaliana] | 456 | 2e-043 |
| XP_002891695 Ran-binding protein 1 domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 453 | 5e-043 |
| XP_002885120 Ran-binding protein 1 domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 281 | 4e-023 |
| NP_566532 NUP50 protein [Arabidopsis thaliana] | 267 | 2e-021 |
| AAM61016 unknown [Arabidopsis thaliana] | 264 | 4e-021 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C829 At1g52380/F19K6_4 | 456 | 1e-043 |
| Q9LW88 Genomic DNA, chromosome 3, P1 clone: MSL1 | 267 | 1e-021 |
| Q8LG62 Putative uncharacterized protein | 264 | 3e-021 |
| C6THH3 Putative uncharacterized protein | 232 | 1e-017 |
| B9SQB9 Ran-binding protein, putative | 229 | 3e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G52380.1 Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein | 456 | 9e-046 |
| AT3G15970.1 Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein | 267 | 7e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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