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Information for unigene UN51976

FASTA Sequence
Unigene ID: UN51976Length: 607 SSR 
GGGTGTCTGAAACGAGTCCAATTCGAAGGAAGCTTTCTAAGACAATCCTAATTATCTGTTTATTTTTTTTTTAAATCTCTTTTCTT
CTTTCTTCTTATTCAGTTTCTCCATTATAAAACTGCATCGTGGGTCAGAACCTCTAAACAAAATCATCAACTCATCTACGAAGAAG
AAGAAGAAAAGGTTTTATATTTTTCTAAGAGATTTAAGATTGTTAACTTTCTTGATCCAAAATGGCATCAAACGACGCTGGAAGGC
CTTTGCCAAAATTTGGGGATTGGGATGTGAATGATCCGGCGACGGCTGATGGATACACGGTGATATTCAGCAAAGCCGGTGAAGAT
AAAAAGACGGGACGGAGTTCGACCAAGACCAATTCTCAGAGGAAACAAGACGGTGATAAACCAGCGGTCAAGAAATGGCTCTGTTT
TACCTTTTCTTGATTTTGTGTTAAATTCTAATCCTAAGAGAGAGTTTAGCTTTGAGCCTAATGCGCCTTTGAGAACTTTTAGTCAT
CTAACACAAGATTCTGCCTTTTTGTTTTCTTATGATATATTCATGCATTGGGTAATAATATGCATAGAATCAACAAAACTTGTAGT
TCTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179357 RPM1-interacting protein 4-like protein [Arabidopsis thaliana]3512e-031
XP_002884074 hypothetical protein ARALYDRAFT_900113 [Arabidopsis lyrata subsp. lyrata]3512e-031
NP_001078495 putative nitrate-responsive NOI protein [Arabidopsis thaliana]2947e-025
XP_002869073 hypothetical protein ARALYDRAFT_912808 [Arabidopsis lyrata subsp. lyrata]2866e-024
BAJ78239 putative nitrate-induced NOI protein [Vicia faba]1971e-013

Swiss-Prot top hits (Blast detail)Scoree value
Q8GYN5 RPM1-interacting protein 41181e-005

TrEMBL top hits (Blast detail)Scoree value
Q9SEY4 At2g176603511e-031
A8MS72 Uncharacterized protein At4g35655.12945e-025
C6TKQ6 Putative uncharacterized protein2103e-015
B6SJI8 Nitrate-induced NOI protein1923e-013
O22633 NOI protein1915e-013

Arabidopsis top hits (Blast detail)Scoree value
AT2G17660.1 nitrate-responsive NOI protein, putative3527e-034
AT4G35655.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Defence response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: nitrate-responsive NOI protein, putative (TAIR:AT2G17660.1); Has 135 Blast hits to 134 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2991e-027
AT5G40645.1 nitrate-responsive NOI protein, putative1824e-014
AT2G04410.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defence response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: NOI (TAIR:AT5G55850.1); Has 141 Blast hits to 140 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).1691e-012
AT5G55850.1 NOI1663e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members