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Information for unigene UN52046

FASTA Sequence
Unigene ID: UN52046Length: 737 SSR 
GGAATGTTGATTCCTCTCTATTATTGTGACCCCTTCTATATGTTTATTGTTCAATTTTACCTTGTGCGATTGAATTTTCATTTATC
AATAGCGGTTCTGTCATTGGTGAGAAGATGTCGGATCATCTGAGTTTATGTACGGATCGTCTCATAACGGGTGAGAGCCTGGAGTC
AGAAAAGGATTGTGGAGAAAGTTCTTGTCCTCAAGGCAGAGATGTGGCTTCTTCTTCTTCTTCTTCGTCTGCGTCTGTGTCTGTGG
ATGAAGCTGAAGATGCGAGGAAGTACTATGCTGTTGTCGCTGCAGAAGAGGAACCGCTTCTCCAGTCTGTTGAGTGCCGTATTTGC
CAGGAGGAAGATATCACTAACAACTTGGAGGCTCCTTGTGCTTGCAATGGCAGTTTGAAGTATGCGCACCGCAAGTGTGTTCAGCG
TTGGTGTAATGAGAAAGGCGACATTGTCTGCGAAATATGCCACCAGCCTTATCAATCTGGATATACAGCACCTCCACCTCCTCCTC
CTGATGAAACTATAATTCACATTGGTGAGGATTGGGAGACTGGAGTTCACTTGGACTTGAGCGACCCGCGCCTTCTAGCAATGGCT
GCAGCAGAACGCCATTTCTTGGAAGCTGACTATGACGAGTACTCTGAGTCTAATTCAAGCGGTGCTGCCTTCTGTCGCTCTGCTGC
TCTCATCCTGATGGCACTTTTACTGTTACGAGATGCACTAAACCTCACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]9231e-097
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8674e-091
NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8479e-089
NP_850667 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8479e-089
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8479e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q86UD3 E3 ubiquitin-protein ligase MARCH31387e-008
Q8BRX9 E3 ubiquitin-protein ligase MARCH31387e-008
Q5XIE5 E3 ubiquitin-protein ligase MARCH31387e-008
Q86YJ5 E3 ubiquitin-protein ligase MARCH91379e-008
Q3TZ87 E3 ubiquitin-protein ligase MARCH91379e-008

TrEMBL top hits (Blast detail)Scoree value
D2KC47 RING-type E3 ubiquitin ligase9239e-098
A9CEI2 Uncharacterized protein At3g47550.28476e-089
Q3E6V0 At3g475508476e-089
Q9SN83 Putative uncharacterized protein At3g475508476e-089
Q9FJJ6 AT5g62460/K19B1_77231e-074

Arabidopsis top hits (Blast detail)Scoree value
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein8474e-091
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein8474e-091
AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein8474e-091
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein8474e-091
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein7239e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members