 |
Information for unigene UN52048
| FASTA Sequence |
| Unigene ID: UN52048 | Length: 773 |
SSR | | GGATTGGTCGTAGAAACTGACCAACAAACTTACTCTGATATTTTTCTCTCTCAACTTCCCAGCTCCCTCGTCGCCGTCGTCGTCGT
CGTCGTCGTCGTCGCCGGCGCGGTTCCCGTCATCTCCTCCGCCCCTACCAAATCAGGCCGCGAGGGAGAAGGAAGATGATTACCTC
ATCGATCGCAAAATTAACGCTGATTTCGATTCTCACAGCTCTTCTCTGCGTCTCTTCGGCTCCGGGAGTGTTCAACGTAAAGTACC
GTTACCCAAGGCTCCAAGGCTCCCTCAGCGCCCTCAAGGAGCACGATGACAAGCGCCAGCTCACAATTCTCGCCGGAATCGATCTT
CCTCTCGGTGGAACCGGTCGCCCTGACATCCTAGGGTTGTATTACGCGAAAATTGGAATTGGGACACCTGCGAAGAGCTATTACGT
TCAAGTGGACACAGGGAGTGATATCATGTGGGTTAACTGCATCCAATGCAGACAGTGTCCTAAAAGAAGCAATCTTGGTATCGAGC
TGACACTCTATGACATTGAGGAGTCAGAGAGCGCCAAGTTGGTTTCTTGTGATGAAGACTTTTGCTACCAGATCAGTGGCGGTCCT
CTCTCTGGGTGCAAAGCTAACATGTCGTGTCCTTATCTTGAGATTTATGGAGATGGCAGCTCTACTGCTGGCTATTTTGTTAAAGA
CGTTGTGCAGTATGATAGTGTGGCTGGTGATCTCAAGACTAAAACGGCTAATGGGAGTGTCATTTTTGGGTGTGGTGCTAGCAGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892309 aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] | 948 | 2e-100 |
| AAF29389 Contains similarity to nucellin from Hordeum vulgare gb|U87148. ESTs gb|T22068, gb|F14251, gb|F14237, gb|F14242 come from this gene [Arabidopsis thaliana] | 937 | 3e-099 |
| NP_563751 aspartyl protease-like protein [Arabidopsis thaliana] | 937 | 3e-099 |
| XP_002320434 predicted protein [Populus trichocarpa] | 794 | 1e-082 |
| XP_002515672 Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] | 792 | 2e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S9K4 Aspartic proteinase-like protein 2 | 437 | 2e-042 |
| Q0IU52 Aspartic proteinase Asp1 | 138 | 7e-008 |
| Q9LX20 Aspartic proteinase-like protein 1 | 138 | 7e-008 |
| A2ZC67 Aspartic proteinase Asp1 | 120 | 9e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9MA42 T20M3.11 protein | 937 | 2e-099 |
| B9IA88 Predicted protein | 794 | 9e-083 |
| B9RPK3 Aspartic proteinase nepenthesin-1, putative | 792 | 2e-082 |
| B9RM62 Aspartic proteinase Asp1, putative | 597 | 6e-060 |
| B8AHK7 Putative uncharacterized protein | 561 | 1e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
