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Information for unigene UN52069

FASTA Sequence
Unigene ID: UN52069Length: 633 SSR 
CACAGAGGAAAGCTTTTGAAACGAAGAGCGCGTTTTTTGTCCGCTAAGTTCAAACGAAGAGACGAACGATCGGAGAGATGGGAGAA
GTGATAGTATTCATCGAAGATACGGATATGAATTCGAGTTTCTCACGCTGCAGAATTTGTCACGAAGAAGAAGAAGAAGCAGAGAG
CTACTTTGAAGCTCCTTGTTCTTGCTCAGGCACCGTCAAGTTTGCTCACAGAGATTGCATACAACGATGGTGCGATGAGAAAGGAA
ACACGATTTGTGAAATATGTCTCCAGGATTATAAACCTGGATACACCACAACTTCAAAACCATCTCGTTTAGTTGAAGCAGCAGTC
ACAATCGGGACGGAGTTCGACCAAGACCAATTCTCAGAGGAAACAAGACGGTGATAAACCAGCGGTCAAGAAATGGCTCTGTTTTA
CCTTTTCTTGATTTTGTGTTAAATTCTAATCCTAAGAGAGAGTTTAGCTTTGAGCCTAATGCGCCTTTGAGAACTTTTAGTCATCT
AACACAAGATTCTGCCTTTTTGTTTTCTTATGATATATTCATGCATTGGGTAATAATATGCATAGAATCAACAAAACTTGTAGTTC
TTGAAATGTGATTAAAGAATGAAAGATTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892113 predicted protein [Arabidopsis lyrata subsp. lyrata]4247e-040
AAG10626 Unknown protein [Arabidopsis thaliana]4183e-039
NP_171761 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]4166e-039
XP_002872858 hypothetical protein ARALYDRAFT_490373 [Arabidopsis lyrata subsp. lyrata]3441e-030
XP_002275880 PREDICTED: hypothetical protein [Vitis vinifera]3395e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q32L65 E3 ubiquitin-protein ligase MARCH21242e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FWY0 T14P4.10 protein4182e-039
Q9XF50 At4g020753376e-030
B7FL62 Putative uncharacterized protein3232e-028
B9RNF6 Protein binding protein, putative3189e-028
B9GSS0 Predicted protein (Fragment)3152e-027

Arabidopsis top hits (Blast detail)Scoree value
AT4G02075.1 PIT1 (pitchoun 1); protein binding / zinc ion binding3482e-033
AT1G02610.1 zinc finger (C3HC4-type RING finger) family protein3284e-031
AT5G38070.1 zinc finger (C3HC4-type RING finger) family protein2551e-022
AT1G14260.1 zinc finger (C3HC4-type RING finger) family protein2344e-020
AT1G14260.2 zinc finger (C3HC4-type RING finger) family protein2344e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members