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Information for unigene UN52136

FASTA Sequence
Unigene ID: UN52136Length: 704 SSR 
GGGTTGTTCTGTTAGTTGTCCTAACCATGAGTTCCTCGATCCAGATCGTTGATGAGATACAAGTTGAAAGTTTGTCTCTTGGAGAT
CAGGATGGAAAGAAGGCTGAGATAATGAGCAGTGAGCTGAGTTTCGGGAACCATGGCGGGTGTTGTGCTATATGCTTGGATACTAT
ACCTCTTCAAGAAACTGCTATGGTTAAAGGCTGTGAACATGCTTACTGTGTGACGTGCATCCTCCGCTGGGCTAGTTACAAAGAGG
TACACACCTGCCCGCAGTGTAAGCATCCGTTTGATTTTCTCAATGTCCACCGCTCTCTTGACGGCAGCGTGGAAGATTTCATGTTC
GAGGAGAGTGTATGCCTCCTCCTTAGAGCATCCTGGTTTAAGCCACTTGAAGCAGTGGAGCGGGTCTCATTCCATGACATTGACAA
TTATGATTTTGACATTCCACCTGAGTATGTGGAGGAGGAGGAGGAGGTGGAAGATGATGATGATGACCTTGACGAGTTTTTGCACG
GCTCAAGTCTTCGTTTAGGAAACAGGAGGTGGGGTGGCAATGGTTTTGTCAGATCAGGCCGCCAAGAAGCAAGACCGGCCCAGCAT
AATAAGCACCGAGGTGGTGGTGGTGGCCAAGCTTCGGCCGCCTCTGAATCCAGCTCTTCCTCGCGTGAGCCAAAGGAGAAGACTAG
TAGCAGTGCCGCTGCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873563 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8792e-092
NP_568264 RING/U-box domain-containing protein [Arabidopsis thaliana]8773e-092
NP_568374 RING/U-box domain-containing protein [Arabidopsis thaliana]7464e-077
XP_002871884 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]7421e-076
NP_001190339 RING/U-box domain-containing protein [Arabidopsis thaliana]7161e-073

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q94CL1 AT5g19430/F7K24_1808772e-092
Q9ASY3 AT5g19430/F7K24_1807463e-077
C6TM19 Putative uncharacterized protein5903e-059
B9SY31 Protein binding protein, putative5886e-059
B9GG85 Predicted protein5851e-058

Arabidopsis top hits (Blast detail)Scoree value
AT5G12310.1 zinc finger (C3HC4-type RING finger) family protein8771e-094
AT5G19430.1 zinc finger (C3HC4-type RING finger) family protein7462e-079
AT4G26110.1 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding1126e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members