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Information for unigene UN52240
| FASTA Sequence |
| Unigene ID: UN52240 | Length: 720 |
SSR | | GGGAAGAAAGATCACTCAGTCACTCACACACACCTCTGGAGTTTATACGTCTGCCCTCTGTTCCTTTCTCAGTTTTCCTCTTTTGA
TTACAAAGCTTCCTTATTTCTTGCTATTAATAGTTTTTTTTTTTTTGTAAGAATTCTTGCTATAAATAGTTGTTGTTGTATCTGTT
GCTTTTAAATTTGCTTACTGATCAAAACCAGAAAGAAAGTTTGTTTCTTTTTGAGTAATTCAGTTGCTAAATGCAAATCCTGCAGG
TTGTTGTTGTTGTTGTTGTTGTTCTCAGCTTGGTGATAGAATGGGTGCTTCTGGGAGATGGATTAAAGCATTGGTTAGTTTCAATA
AGTTAAGGTCTTCTAACAAGGATGATCATGTGAAGGTTGCAAGCAAGAGCCGGTTTAGGAGAAAACATTCAGTTGATTTAGACGCT
GAGAAGCAGCTTCATGAAGATGGATTTGAAGATTCATATGCGCATAGTGTGATAGACGATACTAAAGTATCTACTTCAACTTCACT
ACAATCATATAAAGAGCAAAGTAAGGAACATTATGCAGCAACACGCATTCAAACAGCTTTTCGAGGCTTTCTGGCTAGAAGGGCTT
TACGAGCGTTGAAGGGATTGGTTAGACTTCAAGCCCTTGTTAGAGGACACGCGGTGAGGAAACAAGCAGCTGCGACGCTTCGGTGC
ATGCAAGCGTTAGTGAGAGTCCAGGCTCGTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB03067 unnamed protein product [Arabidopsis thaliana] | 491 | 2e-047 |
| NP_188858 protein IQ-domain 5 [Arabidopsis thaliana] | 491 | 2e-047 |
| XP_002885486 hypothetical protein ARALYDRAFT_898681 [Arabidopsis lyrata subsp. lyrata] | 481 | 2e-046 |
| NP_180187 IQ-domain 6 protein [Arabidopsis thaliana] | 294 | 1e-024 |
| XP_002880762 IQ-domain 6 [Arabidopsis lyrata subsp. lyrata] | 291 | 2e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4D8 Protein IQ-DOMAIN 31 | 191 | 5e-014 |
| Q8LPG9 Protein IQ-DOMAIN 14 | 172 | 7e-012 |
| Q9SF32 Protein IQ-DOMAIN 1 | 159 | 2e-010 |
| Q9FXI5 Protein IQ-DOMAIN 32 | 153 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIE3 Similarity to SF16 protein | 491 | 1e-047 |
| B9RQR6 Calmodulin binding protein, putative | 309 | 1e-026 |
| O64852 At2g26180 | 294 | 8e-025 |
| B9RJ06 Calmodulin binding protein, putative | 283 | 1e-023 |
| B9GHL2 Predicted protein | 276 | 9e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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