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Information for unigene UN52315
| FASTA Sequence |
| Unigene ID: UN52315 | Length: 828 |
SSR | | GCTACATTCAACATTGTATTTTTTTTAACCCAACTCATACGATTCACTACTTGTACCAACAACAACAACAACAACAACAACAATAG
CTAAAGATAAAAGAAATAGATATGTTTTACTGACTAGACATCCCTCTGCATTACAGTGAAGTGGAGAACAAGTGATGACGACGATG
ATGTTTCACTCCTTGTTTCGAGAAGAACGATCCTTCCTATGTCCTCCAAGGATACGAGAGATCTGAAGACCTCTACTGAACGCTTG
ATTGAAGAGCATACGCGTCTGAAACTCCGACACAAAAGGAAACCAAGCCAAGAACGCCACTGGTGTGAACAGCAACAGTCCCATCA
CTATCTCATATCCACGAGCTAGTGTCCTCACTGATCCCCAGAACCCTGCTCTACGCACCACTGGCTTACACGCTTGCGCAATCAAG
AGCATACCCCAGCCTGTAGGCATAAACGCAAGGATGCACACAATAATATCTTGAATCGTCATGTGAGCAAGTGTGATCAATATCAC
AATGATTGCAATAAATGTCATGAATATTAGCCCCTTTATCAACCGGAACATCAGCTGGAAACTCGCACTGAACTTCCTCCTTCCCA
CCGAGATAGTCTTCATCACAAACAATATCAAGAAAATCACCAGCCACGACACTCCATAAACCAGAAAGTTTTTAGTCCTCTCAGTA
ATGGTGAGATGATAAACAAGACCGTATTGATAGATAAAGAACCGCAGCGCCAACAAAATCTCAACAACTATGCCACGCTTTCCCGA
ATGTCTGAGATGCTCTTGCTCTTCCTCCCACCACGACTCCCAACTCTTCTCTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q9LXT9 RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 | 1090 | 7e-117 |
| NP_196804 callose synthase [Arabidopsis thaliana] | 1090 | 7e-117 |
| ABK93276 unknown [Populus trichocarpa] | 1028 | 1e-109 |
| XP_002299147 predicted protein [Populus trichocarpa] | 1028 | 1e-109 |
| XP_002283298 PREDICTED: similar to Callose synthase 3 [Vitis vinifera] | 1023 | 4e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LXT9 Callose synthase 3 | 1090 | 3e-118 |
| Q9AUE0 Callose synthase 1 | 868 | 2e-092 |
| Q9SL03 Callose synthase 2 | 846 | 6e-090 |
| Q9SHJ3 Callose synthase 7 | 698 | 9e-073 |
| Q9LTG5 Callose synthase 4 | 691 | 6e-072 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PA73 Putative uncharacterized protein | 1028 | 8e-110 |
| B9GLL4 Predicted protein | 1028 | 8e-110 |
| B9GYK5 Predicted protein | 1017 | 1e-108 |
| B9SQ55 Transferase, transferring glycosyl groups, putative | 1008 | 2e-107 |
| A2Q2S3 Glycosyl transferase, family 48 (Fragment) | 973 | 2e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13000.1 ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 1091 | 2e-119 |
| AT5G13000.2 ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 1091 | 2e-119 |
| AT1G05570.1 CALS1 (CALLOSE SYNTHASE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 869 | 1e-093 |
| AT2G31960.1 ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 847 | 5e-091 |
| AT1G06490.1 ATGSL07 (glucan synthase-like 7); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | 698 | 9e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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