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Information for unigene UN52474

FASTA Sequence
Unigene ID: UN52474Length: 735 SSR 
CGTAAACAACCGATTTCACTTTCGTCATTTAGAGTTTTAGTGAAATGAGAGAGAACAAATGTTAAAGAAGAGAAGAGAAGAGAAGA
GAAGAGAAGGTAGTAAGTTCAAGAAGGAGTGACGCCCTGTTTGGCCTTCAGGACAAGCTCCTCGGTGGTGGTCCCTATGATCTCGT
TGGCTCGCTTCAGCCCCATGCAGTAGTACCTTCCAATGGTGTCACGGGCAACGATCCCCAACTTCTCTAGCTTCTGGACTGCATCA
TCCACATCAAAGTTACACCTCTTTTACTTCTTGCTGAATAACGTCATCGCACAAGTGTAATAGCATTCCCTTCCCGCTGTCTAGTT
GTTTATCATACATGGATTGCGTTATCAAGTTCTGGTACGTTGCCATGTTCTGCTGGAAAGTGAAGTATGTTTTGGCACAATAACCA
ACCACTGTGGAGAGAACTGCAAAGATTACCCATGGGTCTGCTTTCGGCATCTCAACTGAAGTAACCACGGCAACCAGACCAACTAC
GGCAGATATCAGAAATTTGACCCAATCCATTGGAGTCAGTCCAGGATTTCTTTTCTCAGGAAGCACAATCTCCATGTCGGCCATAG
GAATGTTTTTGAAATGCTCGACGTAAATTCCTCTTTCCTGATTTGTTTTAGAGCTGGCTCGCCTATAAACAACAATCATTCTATCA
AATGTAGGCTCTTGTATCGTGAGTTTGCTCAAGAAACTCTTAAAGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188565 uncharacterized protein [Arabidopsis thaliana]7563e-078
XP_002303016 predicted protein [Populus trichocarpa]6873e-070
XP_002320422 predicted protein [Populus trichocarpa]6766e-069
XP_002512825 conserved hypothetical protein [Ricinus communis]6703e-068
NP_001132136 hypothetical protein LOC100193553 [Zea mays]6651e-067

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8RWC3 Putative uncharacterized protein At3g193407562e-078
B9GNF9 Predicted protein6872e-070
B9IA68 Predicted protein6764e-069
B9RGW6 Putative uncharacterized protein6702e-068
B4FFF5 Putative uncharacterized protein6658e-068

Arabidopsis top hits (Blast detail)Scoree value
AT3G19340.1 LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: aminopeptidase (TAIR:AT5G13940.1); Has 143 Blast hits to 138 proteins in 46 species: Archae - 0; Bacteria - 59; Metazoa - 12; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).7561e-080
AT5G13940.1 aminopeptidase5931e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members