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Information for unigene UN52536

FASTA Sequence
Unigene ID: UN52536Length: 849 SSR 
GGAGATCTAAAACGCGACCTTCTCAGAAACAAAACCTCATCCCCAAAGAGAGAGAGAGAGCCAAAGGCAGAGAGATAGAAAACGAG
TCTCTTCCTTTATAAATCCCATTTTACAAATTTACAAATCTCTTTTTCCCTCTCTAATTTCTCTCTTCCTTCATTTGTGTATATAT
ATACAAATCCTTTGTCCTTTCATATCATTTGGAGGTTACGAAACCCTAGATTTGAGATTCCACATTTCAATCCAACGAAAGAGAAT
GGCTGAACAAGGAATGGAAGGGAGTCAGCCAGTTGACCTTATGAAGCATCCTTCAGGGATTATTCCAACTCTTCAAAACATTGTCT
CGACAGTGAACTTAGACTGCAAGCTTGATCTTAAATCCATAGCTTTGCAGGCTCGTAATGCTGAATATAACCCCAAGCGTTTTGCT
GCAGTAATCATGAGGATAAGAGAGCCAAAAACTACAGCTTTGATTTTTGCTTCTGGGAAAATGGTGTGTACCGGAGCCAAGAGTGA
ACATTTTTCAAAGCTGGCTGCGAGAAAGTACGCTCGGATTGTTCAAAAGCTTGGCTTTCCCGCAAAATTCAAGGATTTCAAGATTC
AGAACATTGTAGGGTCTTGTGATGTCAAATTCCCCATTAGGCTTGAAGGTCTTGCATACTCTCACAGTGCTTTCTCAAGTTACGAG
CCTGAACTATTCCCAGGGCTGATATATAGGATGAAACAACCAAAGATTGTGCTACTTATTTTTGTCTCAGGAAGATTGTTATAACT
GGAGCCAAGATGAGAGAAGAGACTTACACAGCCTTTGAGATATCTACCCAGTTCTTACAGAGTTCAGAAAATCCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894507 hypothetical protein ARALYDRAFT_474610 [Arabidopsis lyrata subsp. lyrata]8335e-087
NP_175948 TATA-box-binding protein 2 [Arabidopsis thaliana]8272e-086
P48511 RecName: Full=TATA-box-binding protein; AltName: Full=TATA sequence-binding protein; Short=TBP; AltName: Full=TATA-binding factor; AltName: Full=TATA-box factor; AltName: Full=Transcription initiation factor TFIID TBP subunit8192e-085
Q42808 RecName: Full=TATA-box-binding protein; AltName: Full=TATA sequence-binding protein; Short=TBP; AltName: Full=TATA-binding factor; AltName: Full=TATA-box factor; AltName: Full=Transcription initiation factor TFIID TBP subunit8192e-085
NP_001105319 TATA-box-binding protein 2 [Zea mays]8183e-085

Swiss-Prot top hits (Blast detail)Scoree value
P28148 TATA-box-binding protein 28271e-087
P48511 TATA-box-binding protein8199e-087
Q42808 TATA-box-binding protein8199e-087
P50159 TATA-box-binding protein 28181e-086
P26357 TATA-box-binding protein8181e-086

TrEMBL top hits (Blast detail)Scoree value
Q53YT7 Putative uncharacterized protein At1g55520 (Fragment)8272e-086
B6SGQ4 Putative uncharacterized protein8182e-085
C5WQG2 Putative uncharacterized protein Sb01g0128808182e-085
B7FMY1 Putative uncharacterized protein8172e-085
C5YSH9 Putative uncharacterized protein Sb08g0222738172e-085

Arabidopsis top hits (Blast detail)Scoree value
AT1G55520.1 TBP2 (TATA BINDING PROTEIN 2); DNA binding / RNA polymerase II transcription factor/ TATA-binding protein binding8271e-088
AT1G55520.2 TBP2 (TATA BINDING PROTEIN 2); DNA binding / RNA polymerase II transcription factor/ TATA-binding protein binding8271e-088
AT3G13445.1 TBP1 (TATA BINDING PROTEIN 1); DNA binding / RNA polymerase II transcription factor/ binding8134e-087
AT3G13445.2 TBP1 (TATA BINDING PROTEIN 1); DNA binding / RNA polymerase II transcription factor/ binding8134e-087

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members