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Information for unigene UN52578
| FASTA Sequence |
| Unigene ID: UN52578 | Length: 751 |
SSR | | GGGAACCTCATCAACTAATCCACTACAATATGTCTTCTTCTTATTCTTCACTCACACTCTTCTTCTTCTTCTTTGCTTCCACATTC
CTCTACACTTCATCAAACTCATTCAACATCACAAACATCTTAAACCAGAACAATGAGTTCTCCACTTTCAACAACCTCCTCTCCCA
AACCGGATTCGCTTCCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTTTCCAACGACGCAATGTCCATGTTTTCCTCCC
AATCAACCGAAGACAACAAGAAAAGCCTCGGCCTCCACATCGTTCTAGACTACTACGACATCAAGAAACTCAGAAGCATAAAATCA
GTGATACTCACCACTCTCTAAGCTTATAGACTCTGTTGCGACACATCCATATAACATCTCGGTGCTTCATATTAGTAGTTACATAT
CTATCATGGATCCCGAAGGTCCTAAAGATCATGGTTCTTCATCTTCACCACTTCCTGTACAACCTCCTGGTGATGATGATTATGAA
TATGACGAGCCACCTTCTCCACCTTCCTCCACTACTAAGCCTTTTGTTGCTGCTGCTACTGCTGCTACCGCTAAGCCACCTTCTTC
TGCAAAAGACAACTCAACAACAAGTGGAGTTCTAGCGATAAGTACTCCTAACTTGGCGTTTTTGTTTGTGATCTCATCCTTTTGGT
GCTTCATGATGGTCTGGTGATGTGATGGTTAAGAGTTGATGAATAAACACATATCAGCTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187872 fasciclin-like arabinogalactan protein 14 [Arabidopsis thaliana] | 364 | 9e-033 |
| ABK28554 unknown [Arabidopsis thaliana] | 364 | 9e-033 |
| XP_002882785 hypothetical protein ARALYDRAFT_478625 [Arabidopsis lyrata subsp. lyrata] | 349 | 5e-031 |
| XP_002512774 Glycoprotein X precursor, putative [Ricinus communis] | 243 | 1e-018 |
| XP_002527970 conserved hypothetical protein [Ricinus communis] | 238 | 4e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LTW9 Fasciclin-like arabinogalactan protein 14 | 364 | 4e-034 |
| Q9ZQ23 Fasciclin-like arabinogalactan protein 3 | 192 | 4e-014 |
| Q9LZX4 Fasciclin-like arabinogalactan protein 10 | 185 | 2e-013 |
| Q9SU13 Fasciclin-like arabinogalactan protein 2 | 179 | 1e-012 |
| O22126 Fasciclin-like arabinogalactan protein 8 | 175 | 3e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MEV6 Putative uncharacterized protein (Fragment) | 364 | 6e-033 |
| B9RGR5 Glycoprotein X, putative | 243 | 7e-019 |
| B9SPQ1 Putative uncharacterized protein | 238 | 3e-018 |
| Q6K6F3 Endosperm specific protein-like | 231 | 2e-017 |
| A5BYV9 Putative uncharacterized protein | 229 | 3e-017 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR) | 364 | 4e-035 |
| AT2G24450.1 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR) | 192 | 3e-015 |
| AT3G60900.1 FLA10 | 185 | 2e-014 |
| AT4G12730.1 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2) | 179 | 1e-013 |
| AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8) | 175 | 3e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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