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Information for unigene UN52593

FASTA Sequence
Unigene ID: UN52593Length: 785 SSR 
GGATCATTAAAATGCAAAGCAAACCAGATTAAAACACTGTGAACGCAAGGTATGCTCTTTCTCGTGATATTTTGATTACTGAAGTC
AGACATGGTCAGAGATTCTGGTGGTTGTGGTGGTGTTCTTCATCTATGGATAAGCTTTAAGTTACAAAGGGATTAAAATAAGGGCT
TGGCGAAAGACGAAATGTGCAAGTGTTATGTCAGAGTAGAGGGGAAGTTTCTGCAGAATCTTAGATGTTATTTGATGCTTCTTCTT
TTCTATCTTGTTCACGGAGGCTGGTCTTGACCCACTTTCAACGTGAGAAGTTTCAACTATTACAACAACAATGTGTTTCAATAAGA
ACGATATGATGGCAAACGAAGTGGGAACCGAGAGACAAGCGTTTGGTTCATCTGAAGAAGAAGATGAATCTCGGGCTGGAAATGCC
AACAATTTGTTACAGATTACTCAACAACAACAACAACAACCGCTAGCTCCTGTTGTTGATTGGGAGAGATATCTCCCAGTTAGATC
GCTTAAGGTTCTTCTTGTGGAGAATGATGACTCAACTCGCCATATTGTTACCGCTCTCTTGAAGAACTGCAGCTATGAAGTTACTG
CTGTTCCGGATGTCCTTGAAGCCTGGACAGTCCTAGAAGACGAGAACAGTTGCATCGACCTTGTCTTAACGGAGGTTGTTATGCCT
GTGAACTCTGGAACCGGTCTGTTGTCCAAGATTATGAGCCATAACACACTTAAGAACATCCCTGTCATAATGATGTCATCTCATGA
TTCCATGGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA58340 pseudo-response regulator 3 [Brassica rapa]6703e-068
XP_002866368 pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]5942e-059
NP_568919 two-component response regulator-like APRR3 [Arabidopsis thaliana]5871e-058
AAY62604 pseudo response regulator 3 [Arabidopsis thaliana]5871e-058
NP_001190575 two-component response regulator-like APRR3 [Arabidopsis thaliana]5871e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9LVG4 Two-component response regulator-like APRR35876e-060
Q93WK5 Two-component response regulator-like APRR73493e-032
Q10N34 Two-component response regulator-like PRR733295e-030
A2XFB7 Two-component response regulator-like PRR733287e-030
A2YQ93 Two-component response regulator-like PRR373108e-028

TrEMBL top hits (Blast detail)Scoree value
D2KK86 Pseudo-response regulator 36702e-068
B9HM08 Pseudo response regulator4141e-038
B9HM09 Predicted protein4141e-038
D0PPG7 Pseudo-response regulator 74077e-038
B9T0R7 Sensory transduction histidine kinase, putative4023e-037

Arabidopsis top hits (Blast detail)Scoree value
AT5G60100.1 APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator5876e-061
AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator3492e-033
AT5G24470.1 APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator2937e-027
AT2G46790.1 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator2883e-026
AT5G61380.1 TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator1522e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members