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Information for unigene UN52617
| FASTA Sequence |
| Unigene ID: UN52617 | Length: 684 |
SSR | | GGAATTATTCATCAAAAACAAATCCAAAATCAAACAGAGAGAGAGAGAGAAAGAAAGAAAGAACAGAGAAAAATGGCCGCACCAGC
AGAATTGATCCCAGCAGGAGAAGTGATCGCTTGCCACACCGTCGCTGACTGGAACGAGAAGTCCAAGGCCGCCAAAGACTCCAACA
AACTGATTGTGATTGACTTCACAGCAACATGGTGCCCACCTTGCCGTTTCATTGCACCCATCTTCGTCGAGTTGGCTAAGAAGCAC
CTTGATGTCGTCTTCTTCAAGGTCGATGTCGATGAATTGAATTCTGTTGCTAAGGATTTCGAAGTTGAGGCCATGCCGACCTTTGT
CTACATGAAGGGTGAAGAGAAGGTCGACAAGGTGGTCGGTGCTGCGAAAGACGAAATCGTAGCCAAGCTTGAGAAGCACTCTCAAG
TTGCTTCGGCTTGATTTGGTTTATCGTTCTCTTCATAACTATTTGCCTAGTAGTATGTTTGGTGTTTTTAATAAAAATCCTTTGTT
GCGTTATTGTCACTTTCACTTGAGTCATCTTTCCCTTTGTGTTGGTTTGGTGTGGTGCCTCTTGCCTTGGGTGTGTGAATAAATGT
TTGCAGACTTTATAACTCGCAGCTATGCTAAATTTTCATGTTATTAACTCTTGAGGTTATTGTGTTACGTCAGATTTCAGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O64432 RecName: Full=Thioredoxin H-type; Short=Trx-H | 554 | 7e-055 |
| P68176 RecName: Full=Thioredoxin H-type; Short=Trx-H; AltName: Full=Pollen coat protein | 547 | 4e-054 |
| AAG35777 thioredoxin-h-like protein 1 [Brassica oleracea var. alboglabra] | 525 | 2e-051 |
| NP_199112 thioredoxin H3 [Arabidopsis thaliana] | 455 | 2e-043 |
| XP_002865467 thioredoxin H-type 3 [Arabidopsis lyrata subsp. lyrata] | 452 | 5e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64432 Thioredoxin H-type | 554 | 3e-056 |
| P68177 Thioredoxin H-type 1 | 547 | 2e-055 |
| P68176 Thioredoxin H-type | 547 | 2e-055 |
| Q42403 Thioredoxin H3 | 455 | 1e-044 |
| Q39241 Thioredoxin H5 | 410 | 2e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FQ63 Thioredoxin-h-like protein 1 (Fragment) | 525 | 1e-051 |
| B9GRI3 Thioredoxin h | 364 | 5e-033 |
| A8HTK0 Thioredoxin h1 | 362 | 9e-033 |
| A9PB87 Putative uncharacterized protein | 362 | 9e-033 |
| Q42015 THIOREDOXINE (Fragment) | 357 | 3e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42980.1 ATTRX3 (THIOREDOXIN 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 455 | 1e-045 |
| AT1G45145.1 ATTRX5; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 411 | 1e-040 |
| AT1G19730.1 ATTRX4; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 369 | 9e-036 |
| AT3G51030.1 ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 346 | 4e-033 |
| AT3G17880.1 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / protein binding | 308 | 1e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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