 |
Information for unigene UN52618
| FASTA Sequence |
| Unigene ID: UN52618 | Length: 701 |
SSR | | GGGTATCAATCTCTACGTAAAAAGCACGAACCTTTAAACCCGGTTCTGTTCTGTCCGCACACACACAAAAGCATTAAGATCACCCC
CCTTTTGTCCGTATCCTCTCTTCTCTCCTCTCTCTATGGGCAACGTGAACGCGAGAGACGAAGCGAACAGTAGCCACCACCACCAC
CACAACAGCAACAACAACAACAACGCATCTCAACTCGAAGACAACAACGACGGTGAGATTCATCAACCCATGTCTTCTTCGGACAC
CACCGCACCTCCTCCTCCTGAGCTCATGGGTCAATCTCCTCCTCAATCTCCTCGCGCCACTCAATCTCCTCTCATGTTTGCTCCTC
AGGTTTTCTCTCTCTCTCTCTCTCTCTTTCCCCTTCAGATTCACTTTCCCTTTTAAAAGACAGATCTGAAAAAATTAAATAAAAAA
GTTTGTATCTTTTTTTAATTTAGGTTCCGGTGCTTCCTCTTCAAAGACCAGATGAAATCCACATCCCAAACCCTTCCTGGATGCAA
TCTCCTTCCTACGAAGAGGCTTGTAACGAGCAAGGTATCCCCACCATGATCACTTGGTGCCATGGTGGTAAGGAGATTGCTGTCGA
AGGTTCTTGGGATAATTGGAAGACAAGGTCTCACCTTTTTTTTTTTTCTTTCTGTTTTGTCTTTTTTCAAATCTCTAATTGTTGTG
TTTGTTTTGATAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870164 AMP-activated protein kinase [Arabidopsis lyrata subsp. lyrata] | 329 | 9e-029 |
| Q9SCY5 RecName: Full=SNF1-related protein kinase regulatory subunit beta-2; Short=AKIN subunit beta-2; Short=AKINB2; Short=AKINbeta2 | 328 | 1e-028 |
| CAB10413 kinase like protein [Arabidopsis thaliana] | 328 | 1e-028 |
| NP_193369 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 328 | 1e-028 |
| NP_001190741 SNF1-related protein kinase regulatory subunit beta-2 [Arabidopsis thaliana] | 328 | 1e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCY5 SNF1-related protein kinase regulatory subunit beta-2 | 329 | 4e-030 |
| Q84VQ1 SNF1-related protein kinase regulatory subunit beta-1 | 175 | 3e-012 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V3H9 Uncharacterized protein At4g16360.2 | 315 | 3e-027 |
| B9IH18 Predicted protein | 261 | 5e-021 |
| B9HCD2 Predicted protein | 259 | 8e-021 |
| B9SA62 Snf1-kinase beta subunit, plants, putative | 253 | 4e-020 |
| A5AP67 Putative uncharacterized protein | 248 | 2e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16360.1 AMP-activated protein kinase | 328 | 5e-031 |
| AT4G16360.2 AMP-activated protein kinase | 315 | 2e-029 |
| AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit, putative | 175 | 3e-013 |
| AT5G21170.2 5'-AMP-activated protein kinase beta-2 subunit, putative | 169 | 1e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
