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Information for unigene UN52650

FASTA Sequence
Unigene ID: UN52650Length: 830 SSR 
CCATTGTTCTACCCATTCTCTCTCTCCCTCTTCCGTTCTTCTAGGGTTTCTTTGATCACGTTCAAAGTTTTCCCCTTTTTCATCTC
AATTCTTTCTCTGTAACAATCAGAGGAAATGGATTCCAATTCACGGATTAATTGTCCTTCCGTTTTCTCATCTTCTTCTTCTTCTT
CTTCGCGACGGTGTCAATCTCGATCAGGTTCAGATTTGTATATAGGTGGAGGGTACGAGGATCTTGAAGGAGAAGACGATTTGAAG
TCGGAGTTTATCTGCCCTTTTTGCGCTGATGTTTTTGACATTGTTGGGCTCTGTTGTCACATTGATGAAGAGCATCCTGTTGAGGT
CAAGAACGGGGTCTGTCCTGTATGCACAAAAAGAGTGGGGTTAGATATCGTTGGCCATATCACTACGCAACATGCAAGCTTCTTCA
AGGTGCAGAGAAGGAGAAGATTGAGAAAAGGAGGATACGGCTCTGCTTATCTCGCCTTGAAGAAAGAACTCCGAGAAGCGAACTTA
CAGTCACTTCTTGGTGGATCTTCTTCAAGTTTCACTTCTTCAACCAATATAGATTCTGATCCGCTTCTGTCATCCTTTGTGTTTAA
CTCACCTCCAAGCAAATCTGCCGCACCTGTTGTAAAAGGAACCTCAGCTACAAAAGTCTCCCATAAGGAAACTCTCAAAAGAGACA
TTCAAGAAGCTCCACTTTCAAGCGAAGATCAAGAGAAGAAGAGAAAAGCGAGTTTGTGCGAGTTTGCTCTTGTCAAACATGCTTGG
AGATGATGATTACTAGAGCGGTTTGAATATAAAGAGTGAGTCTCATGTATGATGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882492 hypothetical protein ARALYDRAFT_477991 [Arabidopsis lyrata subsp. lyrata]8712e-091
NP_187332 protein dehydration-INDUCED 19-4 [Arabidopsis thaliana]8684e-091
BAJ34254 unnamed protein product [Thellungiella halophila]8578e-090
NP_199734 protein dehydration-INDUCED 19-7 [Arabidopsis thaliana]6767e-069
XP_002865722 predicted protein [Arabidopsis lyrata subsp. lyrata]6722e-068

Swiss-Prot top hits (Blast detail)Scoree value
Q8VXU6 Protein DEHYDRATION-INDUCED 19 homolog 48744e-093
Q9FJ17 Protein DEHYDRATION-INDUCED 19 homolog 76763e-070
Q39083 Protein DEHYDRATION-INDUCED 194416e-043
Q84J70 Protein DEHYDRATION-INDUCED 19 homolog 34362e-042
Q6NM26 Protein DEHYDRATION-INDUCED 19 homolog 64353e-042

TrEMBL top hits (Blast detail)Scoree value
B9HX91 Predicted protein5466e-054
B9MZZ9 Predicted protein5403e-053
C6SY55 Putative uncharacterized protein5053e-049
B9RFG1 Putative uncharacterized protein5044e-049
D4P881 Putative uncharacterized protein (Fragment)5011e-048

Arabidopsis top hits (Blast detail)Scoree value
AT3G06760.1 INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding (TAIR:AT5G49230.1); Has 133 Blast hits to 133 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8743e-094
AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding6763e-071
AT3G05700.1 INVOLVED IN: response to water deprivation; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: drought-responsive family protein (TAIR:AT5G26990.1); Has 167 Blast hits to 167 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).4362e-043
AT5G26990.1 drought-responsive family protein4353e-043
AT1G56280.1 ATDI194254e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members