RadishBase

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Information for unigene UN52656

FASTA Sequence

Unigene ID: UN52656	Length: 257	SSR
CTCTTCCTCTTCTCCGCCGCCTCAAGACCTCATCGGTCTCCGTCTGTATCTTCTTAAAAAGATTCTCAGTTGTTTCTGCCAGGCGT AGATAAGTCGTTGAAGTAGTAGCTGATGATGATGATGACTTCACTCGGTGGTGGTGGTGGAGTAGGAGGAGGAGGAGGTGGTGGTG TTGGACCTGTCGGTGGAGGAGGAGGAGGAGGGAGATTCATGCCGTATCCACCGCCTCTTTCTATGCCTCCTTCGGCTCCTCAGTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_001173954 Os04g0438101 [Oryza sativa Japonica Group]	152	1e-008
CAH67579 H0315A08.9 [Oryza sativa Indica Group]	152	1e-008
EEE61046 hypothetical protein OsJ_14899 [Oryza sativa Japonica Group]	152	1e-008
CAN66820 hypothetical protein VITISV_003496 [Vitis vinifera]	151	1e-008
XP_002407298 conserved hypothetical protein [Ixodes scapularis]	147	4e-008

Swiss-Prot top hits (Blast detail)	Score	e value
Q9FKT4 KH domain-containing protein At5g56140	158	7e-011
Q0WLR1 KH domain-containing protein At4g26475	149	8e-010
Q9NP73 UDP-N-acetylglucosamine transferase subunit ALG13 homolog	145	2e-009
P12978 Epstein-Barr nuclear antigen 2	139	1e-008
P21997 Sulfated surface glycoprotein 185	137	2e-008

TrEMBL top hits (Blast detail)	Score	e value
B8AU21 Putative uncharacterized protein	152	7e-009
B9FFB2 Putative uncharacterized protein	152	7e-009
Q01I59 H0315A08.9 protein	152	7e-009
Q7XRA9 OSJNBa0006B20.16 protein	152	7e-009
A5AJX1 Putative uncharacterized protein	151	9e-009

Arabidopsis top hits (Blast detail)	Score	e value
AT4G26480.1 KH domain-containing protein	172	1e-013
AT5G56140.1 KH domain-containing protein	158	5e-012
AT3G22800.1 leucine-rich repeat family protein / extensin family protein	136	2e-009
AT1G54215.1 proline-rich family protein	129	1e-008
AT1G62333.1 unknown protein	126	3e-008

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	1			100%

Unigene Members