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Information for unigene UN52662
| FASTA Sequence |
| Unigene ID: UN52662 | Length: 685 |
SSR | | GACAGAAGGTGCTGAAGATGTGCCTGTTCGGAGTTCTTCAGAAGAATCAGATGATTTTTGGAAATCATTCATCAATCCATCATCAC
CACCACCTTTTGCACCTGGTGAAACCGAGAACGTGGATAAGACAAGTGATGCAGAGACTAAAACAGAGGATAGCGAAAGCAGGAGA
GAAGAGGAGGAGGAGGAGGAGGGTGATACATCCGATTCTCAAACGAAGCCGTCAACAAAACGTGTGAGGAGGAACAAATGGAAACC
TGAGGAAGTAAAGAAGGTAATCAGAATGCGTGGAGAGTTGCACAGCAGGTTCCAAGTGGTGAAAGGTAGAATGGCTTTGTGGGAAG
AGATCTCTTCAAATCTATCTGATGAAGGAATCAACAGAAGCCCTGGACAGTGCAAGTCTCTTTGGGCGTCTCTTATTCAGAAATAC
GAGGAGTGCAAAGCTGATGAAAGAAGCAAGACGAGCTGGTCACATTATGAGGATATGAACAACATTTTGTCTGAGTTAGACACACC
TGCCCTTAACTGATGTGATTACATTACGTTTATCTGGCGAAAAGAATCATCTCCAAATTATTAAATCGAACAGAGACATTCATTAT
GTTATGTAACATGTAAGGATGATTTTTTTGTCTGTAGAAGCCATTAGAGCAGATTTAAATGCCAAGGAAGAAGAAAGCCTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864846 EMB2746 [Arabidopsis lyrata subsp. lyrata] | 681 | 1e-069 |
| BAD44310 putative protein [Arabidopsis thaliana] | 680 | 2e-069 |
| BAB08808 unnamed protein product [Arabidopsis thaliana] | 675 | 6e-069 |
| NP_201147 RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana] | 675 | 6e-069 |
| CAN81787 hypothetical protein VITISV_026006 [Vitis vinifera] | 428 | 3e-040 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q67YC1 Putative uncharacterized protein At5g63420 | 680 | 1e-069 |
| Q84W56 Putative uncharacterized protein At5g63420 | 675 | 5e-069 |
| Q9FMV9 Genomic DNA, chromosome 5, P1 clone:MLE2 | 675 | 5e-069 |
| A5C3R9 Putative uncharacterized protein | 428 | 2e-040 |
| B9I3P4 Predicted protein | 421 | 1e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G63420.1 emb2746 (embryo defective 2746); DNA binding / catalytic/ hydrolase | 675 | 3e-071 |
| AT2G38250.1 DNA-binding protein-related | 168 | 2e-012 |
| AT5G01380.1 transcription factor | 146 | 7e-010 |
| AT1G33240.1 AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor | 126 | 1e-007 |
| AT1G76880.1 trihelix DNA-binding protein, putative | 118 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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