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Information for unigene UN52691
| FASTA Sequence |
| Unigene ID: UN52691 | Length: 677 |
SSR | | GGAAAGACACAAACCAAAGATTCCTTGCACTACTAGTCTCTCTCTCTCTCAAGGTTATGGTAGTGGATGTGTTTTGGTAGTAATGG
GAAAAGGTAGAGCTAAGGCAGTAGAGAAAAGGGTTTTAGATCAGAAGCTGAGAGGATCGGTCAATGTCCCGTCTGGACCGGTTTAT
TACCCGACCGAAGACGAATTCAAAAGCCCTCTAGATTACATACACAAGATCAAGCCCGAGGCAGAGGCTTACGGGATCTGCAAGAT
TGTCCCACCGAGCAGCTGGAAACCGCCTTTCGGTTTGGATTTGGAGTCTGTCAGGTTTCCGACAAAGACGCAGGAGATTCACCGGT
TGCAGTTCCGTCCTGCTTCTTGCAACTCCAAGACGTTTCAGCTGGAGTACGGTAGGTTTGTGGAGGAGCGTTTAGGGAAGAAGGTG
AAGAAGAAGAGGGTGGTGTTCGAAGGGGAGGATTTGGATCTGTGTAAGGTGTTTAATGCGGTGAAGAGGTTTGGGGGTTATGATAA
GGTTGTCAAGGGGAAGAAATGGGGTGAGGTTTATCAGTTTATGAGCTCTGGTGAGAAGATCTCCAAGTGCGCTAAGCATGTTTTGT
GTCAGTTGTATAAAGAGCATTTGTATGAGTTTGAGAAGTATCACGGGATGATGGGCGCGGATCCCGCAAAAGGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002886399 F2K11.14 [Arabidopsis lyrata subsp. lyrata] | 938 | 2e-099 |
| AAF19696 F2K11.14 [Arabidopsis thaliana] | 933 | 8e-099 |
| XP_002509804 transcription factor, putative [Ricinus communis] | 712 | 3e-073 |
| XP_002303585 jumonji domain protein [Populus trichocarpa] | 707 | 1e-072 |
| XP_002437651 hypothetical protein SORBIDRAFT_10g031260 [Sorghum bicolor] | 471 | 3e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q23541 Lysine-specific demethylase rbr-2 | 240 | 8e-020 |
| Q61T02 Lysine-specific demethylase rbr-2 | 230 | 1e-018 |
| Q30DN6 Lysine-specific demethylase 5D | 228 | 2e-018 |
| Q62240 Lysine-specific demethylase 5D | 218 | 3e-017 |
| Q38JA7 Lysine-specific demethylase 5C | 217 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SH34 F2K11.14 | 933 | 5e-099 |
| B9RCC0 Transcription factor, putative | 712 | 2e-073 |
| B9GWH9 Jumonji domain protein (Fragment) | 707 | 9e-073 |
| C5Z2N4 Putative uncharacterized protein Sb10g031260 | 471 | 2e-045 |
| A5BNM2 Putative uncharacterized protein | 423 | 7e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G08620.1 transcription factor | 196 | 1e-015 |
| AT1G30810.1 transcription factor | 187 | 1e-014 |
| AT4G20400.1 transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein | 184 | 3e-014 |
| AT2G34880.1 MEE27 (maternal effect embryo arrest 27); transcription factor | 179 | 1e-013 |
| AT5G46910.1 transcription factor jumonji (jmj) family protein | 148 | 4e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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