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Information for unigene UN52759
| FASTA Sequence |
| Unigene ID: UN52759 | Length: 732 |
SSR | | GGATGGCTTCTTCTTCTTCTTCATCATCCCAACGACGCTGCGTCTTCGTTGGGAACATTCCTTACGACGCAACCGAGGAACAACTC
AAAGAGATTTGCGGAGAGGTTGGACCCGTTGTCTCCTTTAGATTGGTTACTGATAGAGAAACGGGTAAACCGAAGGGATACGGTTT
TTGCGAGTATAAGGACGAGGAGACAGCTTTGAGTGCTCGTCGTAATCTCCAGAGTTACGACATCAATGGGCGTCAGTTGTGAGTTG
ATTTCGCTGAGAATGATAAAGGAACCGACAAACCCCGAGATCAGGGTCAAGCAGGAACTAGTTTGCCTCCTGCTGTTACTGCTACT
GATTCTCAGAAGCAGACTGGAGGGGCTGTGGATCTGAATATGCATCAGCCGGTTGGTCTCAACCTTGCAATGCAAGCTGCGTCTGT
TATGGCGGGTGCGCTAGGTGGTCCACAGGTCGGTTCGCAAAGTACACTGCAGGTTACAGCTAGTGATCCCCTGACTCTTCATCTTG
CCAAGATGTCTAGAAGTCAGCTCTCTGATATTATATCGTCCGTTAAGTTAATGGCTACGCAGAATAAGGAAGACGCTCGACAGTTG
TTGGTTTCAAGACCTCACTTGCTAAAATCTGTCTTTCTGGCACAGATAATGCTAGGGATTGTGAGTCCACAAGTGTTACAGACGCC
AAACATTGTTCACGCCCCAAACCATATGACACGCTCTTCAATTC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002887389 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1027 | 1e-109 |
| NP_177325 cleavage stimulating factor 64 [Arabidopsis thaliana] | 1017 | 2e-108 |
| AAM64164 cleavage stimulation factor 64 [Arabidopsis thaliana] | 1015 | 3e-108 |
| XP_002527116 mRNA splicing factor, putative [Ricinus communis] | 794 | 1e-082 |
| XP_002264617 PREDICTED: hypothetical protein [Vitis vinifera] | 782 | 3e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8HXM1 Cleavage stimulation factor subunit 2 | 311 | 6e-028 |
| P33240 Cleavage stimulation factor subunit 2 | 311 | 6e-028 |
| Q8BIQ5 Cleavage stimulation factor subunit 2 | 311 | 6e-028 |
| Q5RDA3 Cleavage stimulation factor subunit 2 | 311 | 6e-028 |
| Q9H0L4 Cleavage stimulation factor subunit 2 tau variant | 306 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M9G6 Cleavage stimulation factor like protein | 1017 | 1e-108 |
| Q8LKG6 Cleavage stimulation factor 64 | 1015 | 2e-108 |
| B9SM97 mRNA splicing factor, putative | 794 | 8e-083 |
| B4FMY5 Putative uncharacterized protein | 664 | 1e-067 |
| B8BJE1 Putative uncharacterized protein | 662 | 2e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G71800.1 cleavage stimulation factor, putative | 1017 | 7e-111 |
| AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding | 146 | 7e-010 |
| AT1G60900.1 U2 snRNP auxiliary factor large subunit, putative | 145 | 9e-010 |
| AT3G52660.1 RNA recognition motif (RRM)-containing protein | 142 | 2e-009 |
| AT3G52660.2 RNA recognition motif (RRM)-containing protein | 142 | 2e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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