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Information for unigene UN52776

FASTA Sequence
Unigene ID: UN52776Length: 792 SSR 
GGGCCTTCTCTTTCTTCTGACAGTGAAGAGTCCAATCATCTTCCCAATTCTTCTGATAGAGAGAGAGAGATGCTCAACTCCACGGC
GGAGGATTCCGTGGCCGTTCCGCTACTCCCCTCCCCCGTCACGCAACCAACTCCTCCTCTCAAGTCGCCATCGTCGGTTCCAACCT
CTGCCCCGTCGAAAGCCTCGATTACGAGATCGCTGAGAATGATTTCTTCAAGCAGGACTGGAGAGCTCGCAGCAAGACGCAGATCT
TCCAATACGTGTTGATGAAGTGGCTTCTCTGTTTCTTCATCGGCATCATTGTCAGTCTCATCGGTTTCACCAACAACCTCGCTGTC
GAGAATCTCGCCGGTGTTAAGTTCGTCGTTACTTCTAACATGATGTTAGCCGGAAGGTACAGCATGGGCTTCTTTGTTTTCACTGT
TACAAATCTGATTCTCACTCTCTTTGCCTCCCTCATTACCTCTTTTGTTGCCCCTGCTGCTGCTGGTTCCGGTATACCCGAAGTCA
AGGCTTATCTCAACGGTGTTGATGCCCCTGAGATTTTCTCTCTTCGCACTTTGGTTGTTAAGATCATTGGGAACATATCTGCAGTG
TCGGGGTCACTTCTCATTGGTAAGGCAGGGCCTATGGTGCACACTGGTGCTTGCGTTGCCTCCATACTTGGTCAGGGCGGCTCTAA
GAGATATGGACTTACTTGGAGATGGCTTCGGTATTTCAACAACGATAGGGATCGAAGAGATCTCGTTACTTGTGGCTCAGCTGCTG
GTATCGCTGCCTCCTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P60300 RecName: Full=Putative chloride channel-like protein CLC-g; AltName: Full=CBS domain-containing protein CBSCLC610361e-110
NP_198313 putative chloride channel-like protein CLC-g [Arabidopsis thaliana]10361e-110
XP_002870407 hypothetical protein ARALYDRAFT_493576 [Arabidopsis lyrata subsp. lyrata]10342e-110
XP_002331024 Cl-channel clc-7 [Populus trichocarpa]9591e-101
CBI25542 unnamed protein product [Vitis vinifera]9572e-101

Swiss-Prot top hits (Blast detail)Scoree value
P60300 Putative chloride channel-like protein CLC-g10366e-112
Q96282 Chloride channel protein CLC-c7687e-081
P92941 Chloride channel protein CLC-a6826e-071
P92942 Chloride channel protein CLC-b6621e-068
P92943 Chloride channel protein CLC-d5241e-052

TrEMBL top hits (Blast detail)Scoree value
B9N720 Cl-channel clc-79597e-102
B9SXQ0 Chloride channel clc, putative9435e-100
A2XY74 Putative uncharacterized protein8252e-086
B9FCT7 Putative uncharacterized protein8252e-086
Q25A83 H0413E07.11 protein8252e-086

Arabidopsis top hits (Blast detail)Scoree value
AT5G33280.1 chloride channel-like (CLC) protein, putative10365e-113
AT5G49890.1 CLC-C (CHLORIDE CHANNEL C); anion channel/ voltage-gated chloride channel7686e-082
AT5G40890.1 ATCLC-A (CHLORIDE CHANNEL A); anion channel/ nitrate transmembrane transporter/ voltage-gated chloride channel6826e-072
AT3G27170.1 CLC-B (CHLORIDE CHANNEL B); anion channel/ voltage-gated chloride channel6621e-069
AT5G26240.1 CLC-D (CHLORIDE CHANNEL D); anion channel/ voltage-gated chloride channel5241e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members