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Information for unigene UN52801
FASTA Sequence |
Unigene ID: UN52801 | Length: 628 |
SSR | | GGACCTCCCAAACACAATCCAAAGAAGGTTTTACCCAAATCTCTCCTCTCAAAACCCTAAATCTCTCAGTCATTCCATCTTCTCTC
TCGCTTCTGATCTCGATCTCCTTCTTGACTCTGTGTTGAAGGGTTGCGGTGAAGATGTCTGGAGGTTTAGATATGACACTTGATGA
ATCTATAAAGAGGGCTAAGGCTGCAAAATCTGGAGGAAGAGGAACTTCCCGCCGTGGTGGTGGTGGTCGTCGTGATCATGGACCTA
ATGGGTTTCTTGGTGGTGGTGGTGGAAGAGGAAACGGACCTGCTCGAAGAGGCCCTCTTGCTGTGAATTCTCGGACCTCATCTTTC
ACCATTAACAAGCCTGTTCGTAGGACCAGAAGCGTGCCATGGCAGACTGGTTTGTTTGAAGATGGCCTAAGAGCTGCTGGAGTAGA
CGTTGAAACCAGGCTCCATATTACCAACCTGGACAGTGGTGGACGTGGCCGTGGTGGTGGTGGTGGGAGAGGGAATGGGAAGAAGC
CAGTGGAGAAATCGGCTGCTGACCTTGACAAGGATCGTGAGAGCTATCACGCAGATGCCATGAACACTTCTTAAAAAGCCTTAAAA
GAGAATCAGTGTTTGTTTGTTACTAC
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GenBank top hits (Blast detail) | Score | e value |
CAC01084 DIP2 protein [Arabidopsis thaliana] | 298 | 3e-025 |
NP_198588 THO complex subunit 4 [Arabidopsis thaliana] | 298 | 3e-025 |
NP_001078676 THO complex subunit 4 [Arabidopsis thaliana] | 298 | 3e-025 |
XP_002870558 hypothetical protein ARALYDRAFT_493750 [Arabidopsis lyrata subsp. lyrata] | 285 | 9e-024 |
XP_002531919 RNA and export factor binding protein, putative [Ricinus communis] | 215 | 1e-015 |
Swiss-Prot top hits | Score | e value |
No hits found | | |
TrEMBL top hits (Blast detail) | Score | e value |
A8MQ78 Uncharacterized protein At5g37720.2 | 298 | 2e-025 |
Q6NQ72 At5g37720 | 298 | 2e-025 |
Q9LF76 DIP2 protein | 298 | 2e-025 |
B9T100 RNA and export factor binding protein, putative | 215 | 8e-016 |
Q9FHP9 Genomic DNA, chromosome 5, TAC clone:K12B20 | 186 | 2e-012 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G37720.1 RNA and export factor-binding protein, putative | 298 | 1e-027 |
AT5G37720.2 RNA and export factor-binding protein, putative | 298 | 1e-027 |
AT1G66260.1 RNA and export factor-binding protein, putative | 290 | 1e-026 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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