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Information for unigene UN52864

FASTA Sequence
Unigene ID: UN52864Length: 674 SSR 
CTTGTAGAAGAAGAAGAAGAAGAAGATGGGGTTACAAGGTCAACTCTCCGATGTTTCATCAGATTCAATCCCTCTGATGCTCGTCG
CTCTCCTCGCTACTCTTTTCAAACACGTTCGCTCATTCTTCCTCTGCTTCTCAGCCTCTAATCCTCATATCACCGACGACGACGAC
CATGCTACTTCCGTTACTTCAGGACTCGTGAACCTTGTCGTGCTAGCCGACCAGCTCAAACTCAACAGACTCTTCTCCTACAGCTA
CGTTGACAACGCCGCGTCAGACTGCATCGTGTGTTTGTCTACGCTAAAGACCGGAGAAGAAGTGAGGAAACTGGATTGTAGACACG
TGTTCCACAAGCACTGTTTGGAAGGTTGGTTACAACATCTCAATTTCAGTTGCCCGCTTTGTAGATCTACGTTGCTTGCACACGGA
CATAGACATGGACATGGAGAAGGTGAACCGATCTCTCTTCACTCAGCACCCACTGCTTCTCATTGAATTTTCTCTTTATGACACAA
AAAGAAAGGAAAGGAAAGAGAGAAGAAGAGTTTGGGGGTGTGTTTTTGATCTCGTTGCTTTCTCCTCTTTTCTTTTGGTTAATTAT
TTCTTCAAAAAGGGGATTTCTCGAAATTCACTTCTTTATTTTCGTTTCGTCTTTTTTTTTGAAGAAATTTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892849 ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]4481e-042
NP_172962 E3 ubiquitin-protein ligase RHA2A [Arabidopsis thaliana]4435e-042
NP_565253 putative E3 ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]3853e-035
XP_002283507 PREDICTED: hypothetical protein [Vitis vinifera]3801e-034
XP_002875062 hypothetical protein ARALYDRAFT_484022 [Arabidopsis lyrata subsp. lyrata]3782e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZT50 E3 ubiquitin-protein ligase RHA2A4432e-043
Q9ZU51 RING-H2 zinc finger protein RHA2b3851e-036
P87237 Uncharacterized RING finger protein C4G3.12c1403e-008
Q9P7E1 Uncharacterized RING finger protein P4H10.071314e-007
Q8VEM1 Goliath homolog1242e-006

TrEMBL top hits (Blast detail)Scoree value
Q1H5F4 At2g011503852e-035
B9HJ71 Predicted protein3611e-032
B9HWB4 Predicted protein2141e-015
B9SJY5 Putative uncharacterized protein1997e-014
A9NTT7 Putative uncharacterized protein1683e-010

Arabidopsis top hits (Blast detail)Scoree value
AT1G15100.1 RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding4432e-044
AT2G01150.1 RHA2B (RING-H2 FINGER PROTEIN 2B); protein binding / ubiquitin-protein ligase/ zinc ion binding3851e-037
AT2G04240.1 XERICO; protein binding / zinc ion binding1556e-011
AT2G04240.2 XERICO; protein binding / zinc ion binding1556e-011
AT1G67856.1 protein binding / zinc ion binding1351e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members