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Information for unigene UN52865
| FASTA Sequence |
| Unigene ID: UN52865 | Length: 774 |
SSR | | GAACTCTACGTTATCCCAAAGAGTGAGTGTGAGACCACCACATTGATAGCAAGAGAGGAAGAAGAAGAAGAAGAAGCGAGTTTCAC
GAGTTCCCCCCAAAGCAATAAAAAATGGCGGCGGGTGCTCTGAGAATCTCTATTTCTAGTTCGTTGGTTTGTAATCTCAATGGGTC
ACAGAGACGCCCTGCTCTCACTCCTAACCGTCCTACCACCTTTCTCGGTCTTCCTCCTCGCGCTTCTTCTCTTCCTCATCTTCTCG
GTACATCTCGTATTGGGCTTGGCTCTTTAAAGCTATCTCACCGAAGGAAACAATTCTCTGTCTTCGCCGCCGTCGCCGAAGAGGGG
AAGCGCGCTGTGCCGCTCAGAGATTACAGAAACATTGGCATCATGGCTCACATAGACGCTGGAAAGACCACAACAACTGAGAGGAT
TCTCTACTACACTGGAAGAAACTACAAGATCGGCGAAGTCCACGAAGGTACAGCTACGATGGACTGGATGGAGCAAGAGCAAGAGA
GAGGGATCACCATTACTTCTGCTGCAACCACCACGTTCTGGGACAAGCACAGGATCAACATCATCGATACTCCTGGACACGTGGAT
TTCACTCTTGAAGTCGAACGTGCTCTCAGAGTTCTCGATGGAGCTATATGCCTTTTCGACAGTGTTGCTGGCATTGAGCCTCAGTC
CGAGACTGTGTGGAGACAAGCTGATAAATACGGAGTGCCCAGGATTTGCTTTGTGAACAAGATGGACCGTCTTGGAGCTAACTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564801 elongation factor EF-G [Arabidopsis thaliana] | 999 | 2e-106 |
| BAD95114 elongation factor G [Arabidopsis thaliana] | 999 | 2e-106 |
| AAK64040 unknown protein [Arabidopsis thaliana] | 992 | 1e-105 |
| XP_002886457 ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata subsp. lyrata] | 987 | 5e-105 |
| XP_002509581 translation elongation factor G, putative [Ricinus communis] | 820 | 1e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34811 Elongation factor G, chloroplastic | 771 | 3e-081 |
| P35450 Elongation factor G, chloroplastic (Fragment) | 724 | 8e-076 |
| Q2W2I8 Elongation factor G | 683 | 5e-071 |
| A5V605 Elongation factor G | 659 | 3e-068 |
| Q2G8Y3 Elongation factor G | 655 | 8e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q56XT1 Elongation factor G (Fragment) | 999 | 2e-106 |
| Q9SI75 Elongation factor G | 999 | 2e-106 |
| Q94BR7 Putative uncharacterized protein At1g62750 | 992 | 1e-105 |
| B9RBP7 Translation elongation factor G, putative | 820 | 9e-086 |
| C5YCZ2 Putative uncharacterized protein Sb06g023840 | 744 | 6e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G62750.1 SCO1 (SNOWY COTYLEDON 1); ATP binding / translation elongation factor/ translation factor, nucleic acid binding | 999 | 1e-108 |
| AT1G45332.1 mitochondrial elongation factor, putative | 418 | 2e-041 |
| AT2G45030.1 mitochondrial elongation factor, putative | 418 | 2e-041 |
| AT2G31060.2 elongation factor family protein | 256 | 1e-022 |
| AT5G13650.2 elongation factor family protein | 245 | 3e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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