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Information for unigene UN52873
| FASTA Sequence |
| Unigene ID: UN52873 | Length: 745 |
SSR | | TTCATCAGGGCTGTCACTGAAAATCATTATCTGCCTCTCTTCAAACCCTTTATTCGATTTTATTTTTTAAGATAAAATCTGGAAAT
GGCGGGATCTTTAGCCTCACTCCCTACCTTTAGTTTGGTGAATACATCGAGAAGGGGAATCGAGTCTTATGGCTCCAAAAAACGCA
TTGGAGTTGTTCGTTGTTGTTCCTCCGGCGACATTCAGCAGCAGAGAGGGAGATTATTGGGAGAAAGTGCGATTTCATTAGCTTTA
TCGTTGGGCTTGATGACTGGAGGAGTAGTCCCTTCCATTCTTTCCCCTCCCTATGCCAATGCCAATGCCAATGCTGCTGCTGCTGC
TTACGCCGTAGCAAACCCAGCGATTCCAGAGGTGTCGGTGTTGATATCAGGACCTCCCATAAAAGACCCAGGAGCTCTGTTGAGAT
ATGCATTGCCTATCGACAACAAAGCCATCAGAGAAGTTCAGAAGCCTCTTGAGGATATCACTGACAGCCTCAAGATTTCTGGCCTC
AAGGCTCTCGATTCTGTTGAACGGAACGTGAGGCAAGCTAATAGATCACTTCAGCAAGGGAAAAGCATGATTGTGTCTGGTTTTGC
TGAGTCCAAAAAGGATCATGGTAACCAACTGATTCAACAATTGGAAGCTGGTATGCAAGACATGCTACAGATTGTTGAAGATCGGA
AGAGAGATGCGGTTGCTCCTAAACAGAAAGAGATTCTCCAATTTGTTGGCGGAATTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884278 hypothetical protein ARALYDRAFT_477375 [Arabidopsis lyrata subsp. lyrata] | 692 | 8e-071 |
| NP_186797 peptidyl-prolyl cis-trans isomerase CYP38 [Arabidopsis thaliana] | 686 | 4e-070 |
| NP_001118550 peptidyl-prolyl cis-trans isomerase CYP38 [Arabidopsis thaliana] | 686 | 4e-070 |
| BAH20293 AT3G01480 [Arabidopsis thaliana] | 597 | 9e-060 |
| XP_002517345 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 574 | 4e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SSA5 Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic | 704 | 2e-073 |
| O49939 Peptidyl-prolyl cis-trans isomerase, chloroplastic | 483 | 7e-048 |
| Q55118 Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408 | 161 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H5B8 Uncharacterized protein At3g01480.2 | 686 | 3e-070 |
| B9DHS6 AT3G01480 protein (Fragment) | 597 | 6e-060 |
| B9RUU4 Peptidyl-prolyl cis-trans isomerase, putative | 574 | 3e-057 |
| B9IJN4 Predicted protein | 529 | 5e-052 |
| B8BAB3 Putative uncharacterized protein | 483 | 1e-046 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01480.1 CYP38 (cyclophilin 38); peptidyl-prolyl cis-trans isomerase | 704 | 1e-074 |
| AT3G01480.2 CYP38 (cyclophilin 38); peptidyl-prolyl cis-trans isomerase | 704 | 1e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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