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Information for unigene UN52890

FASTA Sequence
Unigene ID: UN52890Length: 465 SSR 
GGACTCTCGTCTTCAATGTTAATCATTTAGATCTTGAGAGAGAGAGAGAAACAAAAATCAAAAATCAAATCATGGCGGCGAAATCG
AAGAACAACCTTCGTTACCAACCGCGAAAATCAGCATCGCGATCGACACAAGCGTTCACGGTGCTGATCGGTCTGCTGGTGGTGCT
TATGATACTTCTAGGTCTGGGGATCTTGTCGCTTCCCAATGCCAACAGAAACTCCTCCAAGCCCAACGATTTGACCAACATTGTAC
GCAAGAGCCAGGATGAGAGCTATGGAGGAGAGGAGGAACCAAAGGCTATTTTCGTAATTTAGCAGACTTTTCCGGACATATATCAG
CCTGATTCCGGCACCACCAAAATATCTTCTTTCTTTCAAAAGAGAAACTTCGACACATTTTGTACTTCTGTAGTATGCAAACTTTT
ATGAGACTGCTCATATTATCATCATCCGTTTATAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884079 oxidoreductase [Arabidopsis lyrata subsp. lyrata]2844e-024
NP_179363 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana]2826e-024
AAM65040 putative prolyl 4-hydroxylase, alpha subunit [Arabidopsis thaliana]2826e-024
XP_002869059 oxidoreductase [Arabidopsis lyrata subsp. lyrata]1912e-013
CAA21467 putative protein [Arabidopsis thaliana]1698e-011

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q24JN5 At2g177202824e-024
Q8LB05 Putative prolyl 4-hydroxylase, alpha subunit2824e-024
Q9SZS9 Putative uncharacterized protein AT4g358101695e-011
Q9FKX6 Prolyl 4-hydroxylase, alpha subunit-like protein1392e-007
C6T5Q6 Putative uncharacterized protein (Fragment)1283e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G17720.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein2825e-026
AT4G35810.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein1732e-013
AT5G66060.1 iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1392e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members