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Information for unigene UN52903

FASTA Sequence
Unigene ID: UN52903Length: 732 SSR 
AGCTCGTGAAGCCCTTCACCACCGAGATGCCAATTTAGAGACTACATAGAGAGAGAGAGAGAGATAATGGTGAAGGCAGCGGGAAA
GCAGAGTTGCGGGCGGCTTGTGTTCGCTTCATTCCTCGCTCTTCTAGCCTTTGGACTCATCGCCGACTTCCTCTGGGCTTCTTCTC
ATCGCTTCTCCTCCTCCGCCATGTTGTCCCTTCCCTCCTCCGTCACCACCTTTGTCGGAAAACTCCCTCCTACTCCTCCCATTGAG
ACGATAGTAGTAATAAGAAGAAGAAGAAGGACGATAATGGTAGAGAAAGGAAGCTTTCTGCAACGTTTCAAGACCTGCCTGCTCCT
CAGCTACATTGGGAGAAGATGTCAGCTGCGCCTGTGCCTCGTCTTGACGGAGCTGCTATTCAGATCAGAAACTTTCTTTACGTCTT
TGCTGGATACGCCAACATTAATCTCGTGCATTCGCATGTTGATGTATACAACTTCGTAGATAACACATGGGGGAGGAAGATTCGAT
ATGCCTAAAGAGATGGCACATTCTCATTTAGGGATGGTCACTGATGGGAGATTCATCTACATCGTCACTGGTCAGTATGGTCCTCA
ATGCAGAGGTCCTACCGCTAAAACATTTGTGCTTGACACTGATACAAATACCTGGAGTGACTTCATTCCTTTACCAGTTCCTAGGT
ATGCTCCAGCTACTCAGCTATGGAGAGGTAGACTCCACGTGGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883284 hypothetical protein ARALYDRAFT_318850 [Arabidopsis lyrata subsp. lyrata]4122e-038
AAG52629 unknown protein; 27363-23366 [Arabidopsis thaliana]4042e-037
NP_175565 kelch-like motif-containing protein [Arabidopsis thaliana]4042e-037
XP_002265018 PREDICTED: hypothetical protein [Vitis vinifera]3853e-035
XP_002446697 hypothetical protein SORBIDRAFT_06g020730 [Sorghum bicolor]3801e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q9LK31 Kelch repeat-containing protein At3g272203116e-028

TrEMBL top hits (Blast detail)Scoree value
Q84VX7 At1g515404041e-037
Q9C8K6 Putative uncharacterized protein F5D21.244041e-037
C5YAX9 Putative uncharacterized protein Sb06g0207303808e-035
B9HK43 Predicted protein3791e-034
A2XUV4 Putative uncharacterized protein3772e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G51540.1 INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571 Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria - 200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other Eukaryotes - 114 (source: NCBI BLink).4049e-040
AT3G27220.1 kelch repeat-containing protein3115e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members