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Information for unigene UN52925
| FASTA Sequence |
| Unigene ID: UN52925 | Length: 750 |
SSR | | GGACGTCCACCTCTCTCTCTCTCTCTCTTTATCTTCTACTTCGTTGGTGCTGTTCCGATTCTATTGATTAGAATTTAGATTCAAGC
TGACTTATGCTTGACGCGGTTGCTCCGGGAGACATGGCTTCCCCCGATGCCGACTTACTGCAGCTTCAGGAGATGTCTACCTTCGT
CCTCAAATCGAGACCCGAATTCACTCAGAAGCTCTTCGATCAGTGGCTCTCTCTCCCCGAAGCTCACCGTCAGGTTGCTTCGTTGC
TTCAAGATGCAATAGCTGGAGCTCCTTTGAATGTTCCTGGGAGTGCATCTGGTTCAGGTCCTGGCACCAGCAACTCTTTACCGTCC
ATGTTCCCTGCCGGAAGTGCTCCTCCGCTTTCACCGAGAAGCTGCGGTTCGCCTCGTGCGATGAAACAGAGGGCCCCTTCTAATTT
AGGCTCTCCTCTTAAAGTACTCAACGAGCCTGTTAAAGAGTCCATACCTCAGTTTTATTTTCAAAATGGTCGTCCGCCTCCAAGCG
AGATAAAAGAGCAATGTATGTTTAGAGTCAACCACTTTTTCTACGGCCACACGGATGAACTGCAAATACAAGAGTTCAAATTAGTC
ACCCGTGAAATCTGCAAGCTTCCGTCTTTCTTCTCCACGTCGCTTTTCAGGAAGATCGATGTCAATAACACAGGTTTTGTTACCAG
GGAAGCATTTATTGATTATTGGGTAAACGGGAACATGCTGATAATGGACAAAACTACCCAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002872330 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] | 968 | 8e-103 |
| NP_198242 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 956 | 2e-101 |
| NP_568509 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 956 | 2e-101 |
| XP_002521983 calcium ion binding protein, putative [Ricinus communis] | 779 | 7e-081 |
| XP_002269177 PREDICTED: hypothetical protein [Vitis vinifera] | 774 | 3e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q06190 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha | 127 | 1e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q5QIT3 Protein phosphatase 2A beta | 968 | 6e-103 |
| Q8VZQ4 Putative phosphatase 2A regulatory subunit B protein | 968 | 6e-103 |
| B9S7L4 Calcium ion binding protein, putative | 779 | 5e-081 |
| B9I5P2 Predicted protein | 766 | 2e-079 |
| B9IPA8 Predicted protein | 756 | 2e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G28900.1 calcium-binding EF hand family protein | 968 | 4e-105 |
| AT5G28850.2 calcium-binding EF hand family protein | 968 | 4e-105 |
| AT1G54450.1 calcium-binding EF-hand family protein | 658 | 3e-069 |
| AT5G44090.1 calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative | 530 | 2e-054 |
| AT1G03960.1 calcium-binding EF hand family protein | 502 | 4e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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